Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i19
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 189 1e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 187 6e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 187 6e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 187 6e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 187 6e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 187 6e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 187 6e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 182 3e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 179 2e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 150 8e-37
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 138 5e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 138 5e-33
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 92 3e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 4e-18
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 82 3e-16
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 81 1e-15
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 81 1e-15
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 77 1e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.050
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.050
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 28 5.8
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 28 7.6
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 189 bits (461), Expect = 1e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
D ++LD GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTG+V +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 188 bits (459), Expect = 3e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
D +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTG+V +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 187 bits (456), Expect = 6e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 90/206 (43%), Positives = 134/206 (65%), Gaps = 2/206 (0%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 453
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 454 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 633
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 634 TLSGHLQKLLATVGYSFTXKADNDIL 711
L+ +L K+L GYSFT A+ +I+
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIV 210
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 182 bits (442), Expect = 3e-46
Identities = 87/209 (41%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
Frame = +1
Query: 91 MSGDAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQ 264
M + +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 265 KRGISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKIT 444
KRGI L +P+ G++ +WD+MEK+WHH FY L I PE V+ + PL P+ ++EK+T
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 445 EILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPV 624
+I+FE+F ++Y+ L+L+ASGRTTG+V ++G ++ P++EG+ L +A +
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Query: 625 DGETLSGHLQKLLATVGYSFTXKADNDIL 711
G L+ ++ K+L GY+FT A+ +I+
Sbjct: 181 AGRDLTDYMMKILTERGYTFTTTAEREIV 209
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 179 bits (436), Expect = 2e-45
Identities = 85/192 (44%), Positives = 127/192 (66%), Gaps = 2/192 (1%)
Frame = +1
Query: 142 KAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRGISHLTWPVSKGLIQ 315
+AGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRGI L +P+ G++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 316 DWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEILFESFTINSLYLARM 495
+WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+FE+F ++Y+A
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 496 QALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGETLSGHLQKLLATVG 675
L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G L+ +L K+L G
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 676 YSFTXKADNDIL 711
YSFT A+ +I+
Sbjct: 185 YSFTTTAEREIV 196
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 150 bits (364), Expect = 8e-37
Identities = 68/162 (41%), Positives = 106/162 (65%)
Frame = +1
Query: 226 GFPEVYCGNEAIQKRGISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSI 405
G + Y G+EA KRGI L +P+ G++ +WD+MEK+WHH FY L + PE V+ +
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 406 HPLCPRKHQEKITEILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFE 585
PL P+ ++EK+T+I+FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++E
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 124
Query: 586 GFPLRNATFMSPVDGETLSGHLQKLLATVGYSFTXKADNDIL 711
G+ L +A + G L+ +L K+L GYSFT A+ +I+
Sbjct: 125 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 166
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 138 bits (333), Expect = 5e-33
Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Frame = +1
Query: 112 IVLDIGSKYTKAGFAGECFPRAVFPSTVGR--FRQSGLVDGFP--EVYCGNEAIQKRGIS 279
IV+D G+ + K G+AG FP +FPS VGR R + V ++ G E Q R +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 280 HLTWPVSKGLIQDWDEMEKLWHHIFYKGLL-IPPEACSVVHSIHPLCPRKHQEKITEILF 456
+ +P+ G++++WD+M +W H F L I P+ C ++ + PL P ++EK+ +++F
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 457 ESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGET 636
E + NS+Y+A L L+A G TGVV +SG ++ PV+EGF L + T + G
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 637 LSGHLQKLLATVGYSFTXKAD 699
++ +L KLL GY+F AD
Sbjct: 189 ITKYLIKLLLQRGYNFNHSAD 209
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 138 bits (333), Expect = 5e-33
Identities = 74/205 (36%), Positives = 124/205 (60%), Gaps = 5/205 (2%)
Frame = +1
Query: 112 IVLDIGSKYTKAGFAGECFPRAVFPSTVGRFR----QSGLVDGFPEVYCGNEAIQKRGIS 279
+V+D GS KAGFAGE P+ F + VGR + +G +DG +++ G +A RG+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDG--DIFIGPKAESNRGLF 68
Query: 280 HLTWPVSKGLIQDWDEMEKLWHHIFYKGLL-IPPEACSVVHSIHPLCPRKHQEKITEILF 456
+ +P+ G++ +W +MEK+W +IF + L I PE V+ + PL P K++E+ EI F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 457 ESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGET 636
E+F + +LY+ L+L+A+GRTTGVV +SG ++A P+ +GF +++A + G
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRD 188
Query: 637 LSGHLQKLLATVGYSFTXKADNDIL 711
++ +L+ LL GY F + +I+
Sbjct: 189 VTEYLRVLLRREGYEFHRSNEFEIV 213
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 92.3 bits (219), Expect = 3e-19
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 20/209 (9%)
Frame = +1
Query: 97 GDAI-GIVLDIGSKYTKAGFAGECFPRAVFPSTVGRF---------RQSGLVDGF----- 231
GD + G+V D GS+ + GFAGE +P+ PS + +Q + +G
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 232 ----PEVYCGN-EAIQKRGISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVV 396
+ G + I R +++ + +GLI+DW+ EK+ H + L P V+
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Query: 397 HSIHPLCPRKHQEKITEILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAP 576
S R +EK+TEI+FE F + + YL++ L+ FA GRT G++ +SG + + P
Sbjct: 128 FSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVP 187
Query: 577 VFEGFPLRNATFMSPVDGETLSGHLQKLL 663
VF+G+ + +A P+ G+ ++ L ++L
Sbjct: 188 VFDGYAVTHAVVKCPIGGDLITEQLAQML 216
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.6 bits (210), Expect = 4e-18
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Frame = +1
Query: 115 VLDIGSKYTKAGFAGECFPRAVFPSTVG-----------RFRQSGLVD-GFPEV--YCGN 252
V+D G+ YTK G+AG P+ + PS + R + V G ++ + G+
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGD 69
Query: 253 EAIQKRGISH-LTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKH 429
EA+ ++ + +P+ G+++DWD ME+ W +K L PE + + PL ++
Sbjct: 70 EALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPEN 129
Query: 430 QEKITEILFESFTINSLYLARMQALALFASGRT--------TGVVWESGYSCSYAAPVFE 585
+E EI+FESF + LY+A LAL AS + TG+V +SG ++ PV +
Sbjct: 130 REYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVAD 189
Query: 586 GFPLRNATFMSPVDGETLSGHLQKLL 663
G+ + + P+ G ++ +Q LL
Sbjct: 190 GYVIGSCIKHIPIAGRDITYFIQSLL 215
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 82.2 bits (194), Expect = 3e-16
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
D +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKL 339
I L +P+ G++ +WD+MEK+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKL 339
I L +P+ G++ +WD+MEK+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 80.6 bits (190), Expect = 1e-15
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEMEKL 339
I L +P+ G++ +WD+MEK+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +1
Query: 100 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 273
D +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 274 ISHLTWPVSKGLIQDWDEM 330
I L +P+ G++ +WD+M
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.050
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Frame = +1
Query: 292 PVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEILFESFTI 471
P+ +G + +WD +++W F + + + + L P + +EILF+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPAL-PDVSSEILFDYFGF 120
Query: 472 NSLYLARMQALALFASGRTT----GVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGETL 639
++ L S + VV +SG+S + A G ++++ V G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 640 SGHLQ 654
+ L+
Sbjct: 181 TNKLK 185
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.050
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Frame = +1
Query: 292 PVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEILFESFTI 471
P+ +G + +WD +++W F + + + + L P + +EILF+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPAL-PDVSSEILFDYFGF 120
Query: 472 NSLYLARMQALALFASGRTT----GVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGETL 639
++ L S + VV +SG+S + A G ++++ V G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 640 SGHLQ 654
+ L+
Sbjct: 181 TNKLK 185
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 629 PSTGDINVAFLNGNPSKTGAAYEHEYPL 546
PS+ +N+ +G P G+ EH+YP+
Sbjct: 141 PSSVPVNLQHTSGAPGLPGSQMEHQYPM 168
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 301 KGLIQDWDEMEKLWHHIFYKGLLIPPEACS 390
K + W + K W+ FY+ IP CS
Sbjct: 248 KRIYTSWSQFRKSWYMFFYQNEKIPEMLCS 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,283,949
Number of Sequences: 27780
Number of extensions: 352292
Number of successful extensions: 1066
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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