Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i14
(566 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein. 30 6.5
U26644-1|AAC50259.1| 2504|Homo sapiens fas protein. 30 6.5
BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase pro... 30 6.5
BC014631-1|AAH14631.1| 774|Homo sapiens FASN protein protein. 30 6.5
AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase pro... 30 6.5
AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein pr... 30 6.5
AB065801-1|BAC06020.1| 308|Homo sapiens seven transmembrane hel... 30 6.5
Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for ... 29 8.6
X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit p... 29 8.6
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 29 8.6
M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein. 29 8.6
BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein. 29 8.6
BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein. 29 8.6
AY653037-1|AAT74745.1| 162|Homo sapiens proteoglycan 4 protein. 29 8.6
AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion g... 29 8.6
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 29 8.6
AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, be... 29 8.6
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 29 8.6
AJ628243-1|CAF31636.1| 38|Homo sapiens keratin associated prot... 29 8.6
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 29 8.6
AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated prot... 29 8.6
>U29344-1|AAA73576.1| 2509|Homo sapiens fatty acid synthase protein.
Length = 2509
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 116 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 220
V + RG S C+S R+ P C G L TVY
Sbjct: 1531 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1565
>U26644-1|AAC50259.1| 2504|Homo sapiens fas protein.
Length = 2504
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 116 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 220
V + RG S C+S R+ P C G L TVY
Sbjct: 1528 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1562
>BC063242-1|AAH63242.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 116 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 220
V + RG S C+S R+ P C G L TVY
Sbjct: 1533 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1567
>BC014631-1|AAH14631.1| 774|Homo sapiens FASN protein protein.
Length = 774
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 116 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 220
V + RG S C+S R+ P C G L TVY
Sbjct: 439 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 473
>AY451392-1|AAS09886.1| 2511|Homo sapiens fatty acid synthase protein.
Length = 2511
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 116 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 220
V + RG S C+S R+ P C G L TVY
Sbjct: 1533 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1567
>AB209988-1|BAE06070.1| 2548|Homo sapiens FASN variant protein
protein.
Length = 2548
Score = 29.9 bits (64), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 116 VMSAIRGGCSGCPSPCNSTRNCTPCCSGGSLVTVY 220
V + RG S C+S R+ P C G L TVY
Sbjct: 1570 VSTLTRGDLSSIRWVCSSLRHAQPTCPGAQLCTVY 1604
>AB065801-1|BAC06020.1| 308|Homo sapiens seven transmembrane helix
receptor protein.
Length = 308
Score = 29.9 bits (64), Expect = 6.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 183 VQFLVELQGDGHPLQPPRIAD-ITVCNLLIASMRSHILDLFCTVNFLYFEILSFV 22
V F++ L GH + P + + + L AS+R +I+ C ++ L F+I++ V
Sbjct: 159 VLFILRLPFCGHQIIPHTYGEHMGIARLSCASIRVNIIYGLCAISILVFDIIAIV 213
>Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for
beta-subunit of cell surface adhesion glycoproteins
LFA-1, CR3 and p150,95. ).
Length = 761
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 607 CPGCPSPCGKYISCAEC 623
>X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit
protein.
Length = 769
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 93 YDKCCPDYESFCAEVHNPTSPP 114
>M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein.
Length = 769
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein.
Length = 758
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 604 CPGCPSPCGKYISCAEC 620
>BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein.
Length = 769
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>AY653037-1|AAT74745.1| 162|Homo sapiens proteoglycan 4 protein.
Length = 162
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 62 YDKCCPDYESFCAEVHNPTSPP 83
>AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion
glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
protein.
Length = 769
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 93 YDKCCPDYESFCAEVHNPTSPP 114
>AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 769
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 140 CSGCPSPCNSTRNCTPC 190
C GCPSPC +C C
Sbjct: 615 CPGCPSPCGKYISCAEC 631
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 29.5 bits (63), Expect = 8.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 108 YKLLCPQFEAVAADAHRPVTPP 173
Y CP +E+ A+ H P +PP
Sbjct: 52 YDKCCPDYESFCAEVHNPTSPP 73
>AJ628243-1|CAF31636.1| 38|Homo sapiens keratin associated protein
5-3 protein.
Length = 38
Score = 29.5 bits (63), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 7 SGCGSSCCQSSCCNPCCSQSS 27
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 29.5 bits (63), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 134 SGCGSSCCQSSCCNPCCSQSS 154
>AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated protein
protein.
Length = 288
Score = 29.5 bits (63), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 143 SGCPSPCNSTRNCTPCCSGGS 205
SGC S C + C PCCS S
Sbjct: 257 SGCGSSCCQSSCCNPCCSQSS 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,150,203
Number of Sequences: 237096
Number of extensions: 1625876
Number of successful extensions: 4031
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4024
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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