Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i11
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 75 1e-14
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 73 4e-14
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 70 3e-13
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 60 3e-10
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 56 6e-09
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 47 2e-06
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 42 8e-05
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 39 8e-04
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 38 0.002
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 37 0.003
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.004
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.006
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 30 0.37
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 27 2.6
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 3.4
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 26 4.5
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 26 4.5
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 6.0
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 6.0
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 74.5 bits (175), Expect = 1e-14
Identities = 51/153 (33%), Positives = 77/153 (50%)
Frame = +2
Query: 152 AGANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVC 331
AG +IV S+ + +LQ++ D ++ I KV+++LG D L+NNA +A
Sbjct: 33 AGIDIVDPSKVQDAALALQADVSKADQIETAI------EKVIQTLGPIDVLINNAGLADD 86
Query: 332 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 511
PF S ++D + ++ + V M + G+IVNI S L Y
Sbjct: 87 TPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPA-Y 145
Query: 512 SASKAALDALTRAMALELGPYGIRVNAINPTVI 610
SA+KA L+ LT+A+A+ GP GIRVN P I
Sbjct: 146 SAAKAGLENLTKALAVRYGPLGIRVNVCAPGTI 178
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 72.9 bits (171), Expect = 4e-14
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Frame = +2
Query: 155 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCE 334
G N L T L + + ++ I DV D + + + ES+ D +V+ A V
Sbjct: 32 GRNEFHLKETLQSLSVAKGQQHTLTIADVQ-SDMKNLKSIFESV-EIDTVVHAAGVLQSS 89
Query: 335 PFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA---IVNISSQASKAALKDHT 505
+ S D N+ + + +S++ + NK I+NISS+ S AL +
Sbjct: 90 LCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTS 149
Query: 506 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKS 631
+Y+ASKA L++ T+ +A E+ GIRVNAI+P + T M S
Sbjct: 150 VYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPMLSS 191
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 70.1 bits (164), Expect = 3e-13
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Frame = +2
Query: 155 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESL-----GHFDALVNNAA 319
G ++A +R +++L + + +D+ D + R+V + + G L+NNA
Sbjct: 29 GFQVLATARQVERMDNLTKA--GLQTLKLDVTDEDSVREVEQEVRKFTNGSLHYLINNAG 86
Query: 320 VAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKD 499
P +D + K DVN V+ +++ ++I K G IVN++S S
Sbjct: 87 APCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK--GTIVNVNSLVSYVPFAF 144
Query: 500 HTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 622
+ Y+ASKAAL A + + +EL P+G++V +I + T++
Sbjct: 145 NAAYNASKAALLAYSNTLRIELAPFGVQVTSIMTGGVQTKI 185
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 60.1 bits (139), Expect = 3e-10
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 275 VESLGHFDALVNNAAVA-VCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG 451
++ LG D LVNN A V + D +D TF N+ + +++ M K+
Sbjct: 116 LKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM---KSGS 172
Query: 452 AIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKS 631
+IVN SS + D Y+++K A+ A TR ++ + +GIRVNA+ P I T + S
Sbjct: 173 SIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPLVSS 232
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 55.6 bits (128), Expect = 6e-09
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = +2
Query: 155 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVES-LGHFDALVNNAAVAVC 331
G N++A SR + S+ + + D+ E K + G+ D ++NNA +
Sbjct: 29 GYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLV 88
Query: 332 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 511
F + + +VN V I++ M E+ G I+ ISS A ++Y
Sbjct: 89 GEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMY 148
Query: 512 SASKAALDALTRAMALELGP-YGIRVNAINPTVIMTEMAKS 631
+ASK A++ L++ + EL P + I + + P + TE A S
Sbjct: 149 NASKFAVEGLSQTIMRELDPNWNIAITIVQPGGMQTEWASS 189
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 47.2 bits (107), Expect = 2e-06
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 11/186 (5%)
Frame = +2
Query: 92 ILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEY--------PSIDIVDVDI 247
ILVT EL GAN+ ++RT + L+ +E + VD+
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 248 GDWEKTRKVVESLGHF-DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVAR 424
+E ++E L D +V+ A + F + PS F+K N A + + R
Sbjct: 85 TSYESVHSMIERLPFCPDHVVHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCHAAIR 144
Query: 425 KM--IENKTHGAIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAIN 598
+M I I+ + S S + ++ YS KAA+ L ++ E Y I V+
Sbjct: 145 RMKEISPSYSRRILLVGSLLSSLPIIGYSAYSPVKAAVRNLADSLRQECILYDIEVSVYL 204
Query: 599 PTVIMT 616
P+ I++
Sbjct: 205 PSTILS 210
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 41.9 bits (94), Expect = 8e-05
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Frame = +2
Query: 149 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKTR----KVVESLGHFDAL- 304
+ G + A +R + S L+ + ++ I+ +D+ + +V + + D L
Sbjct: 29 KEGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVTSLRSAKDAAMQVEKVVKCIDVLW 88
Query: 305 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 484
VN+ +P L S + + NV +++ Q + E K + S A
Sbjct: 89 VNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFTSSMAACM 148
Query: 485 AALKDHTI--YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 622
++ +T Y SKAAL+ + ++ EL G V +I+P V+ T+M
Sbjct: 149 GGVRPNTYSAYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNTDM 196
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 38.7 bits (86), Expect = 8e-04
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +2
Query: 299 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 478
AL+N AA+A L S K F+ NV L I+ + ++++ + +VNI+S
Sbjct: 109 ALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAITSALFPLLLQDP-NPHVVNIASSL 167
Query: 479 SKAALKDHTIYSASKAALDALTRAMALEL 565
+ + YS+SKAAL +L + E+
Sbjct: 168 AYFSAMGVGAYSSSKAALVSLHETLEEEV 196
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 37.5 bits (83), Expect = 0.002
Identities = 32/170 (18%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Frame = +2
Query: 149 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGH----FDALV 307
R G + A +R + L+ +P++ V++D+ + + +S+ D L
Sbjct: 28 REGTTVFASARKPEAATELQEWSKSHPNVKTVELDVTSQQSANEAAQSVAKAVDGIDVLW 87
Query: 308 NNAAVAVCEPF---LDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 478
N+ + C+ + ++ ++ + NV +++ + + + KT I S
Sbjct: 88 LNSGI--CQSYYTVMEAPEEVWNAHYQTNVLGPIHVFKAFYPLLTKKKTRQVIFTSSECG 145
Query: 479 SKAALK--DHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 622
S + + Y SKAA++ + +++EL +I+P V+ T+M
Sbjct: 146 SMGDFRATGFSAYGQSKAAINFTMKELSVELADEHFTFISIHPGVVKTDM 195
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 36.7 bits (81), Expect = 0.003
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 18/201 (8%)
Frame = +2
Query: 80 KGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSIDIV---DVDIG 250
KG +VT +L +G N+V +SRT+ L++L E ++ V + I
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAID 115
Query: 251 DWEKTRKVVESLGHFD-------ALVNNAAVAVCEP--FLDCSPSNFDKTFDVNVKAVLN 403
+ T + E L H D L+NN + P F + + D +N L+
Sbjct: 116 YTKTTAETFEKL-HQDLVGTPITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLH 174
Query: 404 ISQVVARKMIENKTHG------AIVNISSQASKAALKDHTIYSASKAALDALTRAMALEL 565
++ V M+ + I+ + S A + Y+ SKA L + ++ E+
Sbjct: 175 TTKAVLSIMLRERQKNEKGPRCLILTMGSFAGLLPSPYLSTYAGSKAFLSNWSASLGEEV 234
Query: 566 GPYGIRVNAINPTVIMTEMAK 628
GI V N ++++ M+K
Sbjct: 235 KKQGIDVWCFNSYLVVSAMSK 255
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 36.3 bits (80), Expect = 0.004
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Frame = +2
Query: 149 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKT----RKVVESLGHFDAL- 304
R G + A +R + L+ + ++ I+ +D+ E ++V + + D L
Sbjct: 28 RKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVSSLESANEAAQEVTKVVDAVDVLW 87
Query: 305 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 484
VN+A P ++ ++ + NV +++ Q + + ++ + S S
Sbjct: 88 VNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQAFYPLIKKGRSKIIVFTSSLAGSM 147
Query: 485 AAL--KDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 628
A + Y SKAAL+ + ++ EL G V +I+P + T+ A+
Sbjct: 148 GAFFPSSQSAYGQSKAALNYTMKEISFELQDEGFIVISIHPGAVRTDSAQ 197
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 35.9 bits (79), Expect = 0.006
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Frame = +2
Query: 149 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKT----RKVVESLGHFDAL- 304
R G + A +R + L+ + ++ I+ +DI E ++V +++G D L
Sbjct: 28 REGTVVFASARKPEAATELQEWSKSHSNVHIIKLDISSLESANEAAQEVAKAVGKVDVLW 87
Query: 305 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 484
VN+ L+ ++ + NV +++ Q + + ++ + S S
Sbjct: 88 VNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVYQAFYPLVKKGESKIIVFTSSLVGSM 147
Query: 485 AALK--DHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 628
A + + Y SKAAL+ + ++ EL G V +I+P ++ T+ A+
Sbjct: 148 GAFFPFNQSGYGQSKAALNFTMKEISFELQDEGFIVISIHPGMVRTDSAQ 197
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 29.9 bits (64), Expect = 0.37
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 691 NLPSGILESISLAFIGSDQPTFSHLSHYH 605
N P G+L +A G D P+ +H+ HYH
Sbjct: 437 NNPKGVLVCTDVAARGIDIPSVTHVIHYH 465
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 509 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 628
Y SK A + A+A L YGI +++P VI TE+ +
Sbjct: 213 YGQSKYAQILYSIALAKRLEKYGIYSVSLHPGVIRTELTR 252
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 230 IVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCE 334
++ VDI D T + + ++GH L N AV C+
Sbjct: 586 VIPVDICDIRLTFQSMSAMGHLTFLDNRIAVVSCD 620
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 317 AVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQV 415
++++ E +DCSPS D+ D ++A+ I ++
Sbjct: 1122 SLSILEKLVDCSPSIIDEQVDTILEALRKIIEL 1154
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = -3
Query: 691 NLPSGI-LESISLAFIGSDQPTFSH--LSHY 608
+LP + L+ ++L +IG D PT S +SHY
Sbjct: 204 SLPKSLSLQDMTLLYIGPDSPTLSSILMSHY 234
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 278 ESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVN 385
E+ A VN+A+ V EPF+ NFD + VN
Sbjct: 259 ETAEEIQAKVNDASADVHEPFVYNHFRNFDASMHVN 294
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 215 YPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNA 316
+P+ ++G W R +E+L +FDA N A
Sbjct: 593 FPNSGKTPTEVGVWSIVRGALETLQNFDARNNTA 626
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,587
Number of Sequences: 5004
Number of extensions: 49701
Number of successful extensions: 180
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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