Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i09
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80955-2|AAM97946.1| 181|Caenorhabditis elegans Mlp/crp family ... 35 0.060
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 34 0.079
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 34 0.079
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 34 0.10
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 34 0.10
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 34 0.10
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 34 0.10
Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 34 0.10
Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical p... 34 0.10
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 34 0.10
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 34 0.10
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 32 0.32
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 32 0.32
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 32 0.32
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 31 0.98
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 31 0.98
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 29 2.3
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 29 2.3
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 29 2.3
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 29 2.3
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 29 3.0
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 29 3.0
Z81532-3|CAC70088.2| 659|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 29 3.9
Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical p... 28 6.9
Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical p... 28 6.9
U39998-7|AAK71422.2| 100|Caenorhabditis elegans Hypothetical pr... 28 6.9
AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic ac... 28 6.9
AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical ... 28 6.9
AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical ... 28 6.9
AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic ac... 28 6.9
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 27 9.1
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 27 9.1
>U80955-2|AAM97946.1| 181|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform c protein.
Length = 181
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSE-TDLLNAEIFKGAIFCGKCSKR 290
C C +S++ E++ GY +H C KC +C++ D ++ + +FC +C R
Sbjct: 11 CPKCGKSVYAAEEMSAG-GYKWHKFCFKCSMCNKLLDSMSCCEHQAQLFCKQCHCR 65
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSE-TDLLNAEIFKGAIFCGKCSKRIF 296
C C +S++ E++ GY +H C KC +C++ D + ++C +C R F
Sbjct: 11 CPKCGKSVYAAEEMSAG-GYKWHKFCFKCNMCNKLLDSCTVAPHEAELYCKQCHGRKF 67
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSE-TDLLNAEIFKGAIFCGKCSKRIF 296
C C +S++ E++ GY +H C KC +C++ D + ++C +C R F
Sbjct: 11 CPKCGKSVYAAEEMSAG-GYKWHKFCFKCNMCNKLLDSCTVAPHEAELYCKQCHGRKF 67
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 435 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 494
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 495 RCSKCKKV 502
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 472 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 531
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 532 RCSKCKKV 539
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 472 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 531
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 532 RCSKCKKV 539
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 380 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 439
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 440 RCSKCKKV 447
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 435 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 494
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 495 RCSKCKKV 502
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 472 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 531
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 532 RCSKCKKV 539
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 472 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 531
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 532 RCSKCKKV 539
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 380 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 439
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 440 RCSKCKKV 447
>Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical
protein F25H5.1e protein.
Length = 454
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 302 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 361
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 362 RCSKCKKV 369
>Z81068-10|CAJ30226.1| 258|Caenorhabditis elegans Hypothetical
protein F25H5.1d protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 106 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 165
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 166 RCSKCKKV 173
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 75 KISKQRKS*SFKMACEVCDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEI- 251
+I+KQR S ACE C E NE + S+H RC C C + +
Sbjct: 6 QITKQRNSGKRHRACE---RCREQFELNEPYFLLGASSWHMRCFLCAQCMDPLVGTTYFQ 62
Query: 252 FKGAIFCGKCSKRIFND-CASAKQ 320
F+ I+C K ++ CA +
Sbjct: 63 FENRIYCEHDFKTLYAPVCAKCNE 86
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +3
Query: 108 KMACEVCDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKGAIFCGKCSK 287
KM C+ C + + N D++ ++ +H KC C + +A K +FC +C
Sbjct: 137 KMRIYNCNKCKQHVD-NSDLLTYQENPYHAYHFKCTTCKKVLESDARTIKDDLFCPRCFD 195
Query: 288 RIFNDCASAKQI 323
C K++
Sbjct: 196 FKCEVCFDCKKV 207
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKG-AIFCGKCSKRIF-N 299
CD C+E + ++G +H++C C C + I K +FCG C + F
Sbjct: 472 CDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAIGTKSFIPKNDDVFCGPCYEEKFAT 531
Query: 300 DCASAKQI 323
C+ K++
Sbjct: 532 RCSKCKKV 539
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWE-GYSFHNRCHKCFVC 221
C HC+E L R ++V +H C KC+VC
Sbjct: 800 CAHCNEELGRGAAMIVESLNLFYHLACFKCYVC 832
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform a protein.
Length = 1004
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWE-GYSFHNRCHKCFVC 221
C HC+E L R ++V +H C KC+VC
Sbjct: 936 CAHCNEELGRGAAMIVESLNLFYHLACFKCYVC 968
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform c protein.
Length = 1099
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWE-GYSFHNRCHKCFVC 221
C HC+E L R ++V +H C KC+VC
Sbjct: 1031 CAHCNEELGRGAAMIVESLNLFYHLACFKCYVC 1063
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFK-GAIFCGK 278
C+ C+E ++ + I + S+H C KC +C E+ L +K G I+C +
Sbjct: 29 CNCCNEQIY-DRYIYRMDNRSYHENCVKCTIC-ESPLAEKCFWKNGRIYCSQ 78
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFK-GAIFCGK 278
C+ C+E ++ + I + S+H C KC +C E+ L +K G I+C +
Sbjct: 29 CNCCNEQIY-DRYIYRMDNRSYHENCVKCTIC-ESPLAEKCFWKNGRIYCSQ 78
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 123 VCDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKGAIFCGKC 281
VC CH + + I + G SFH KC C+ + G ++C +C
Sbjct: 145 VCHKCHAMIDDGQHIK-FRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRC 196
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 123 VCDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSE--TDLLNAEIFKGAIFCGKCSKRIF 296
VC C++ + +V G +H+ C C C E D + E ++G +C +F
Sbjct: 20 VCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFE-YEGRKYCEHDFHVLF 78
Query: 297 NDC 305
+ C
Sbjct: 79 SPC 81
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 123 VCDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSETDLLNAEIFKGAIFCGKC 281
VC CH + + I + G SFH KC C+ + G ++C +C
Sbjct: 145 VCHKCHAMIDDGQHIK-FRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRC 196
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 123 VCDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSE--TDLLNAEIFKGAIFCGKCSKRIF 296
VC C++ + +V G +H+ C C C E D + E ++G +C +F
Sbjct: 20 VCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFE-YEGRKYCEHDFHVLF 78
Query: 297 NDC 305
+ C
Sbjct: 79 SPC 81
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -2
Query: 356 PPIFGSNFRFSNLFG*CAIIENSLRTFAAEYSALE 252
PP +G FRF +L+G +++ S+ FA Y A++
Sbjct: 703 PPFWGGPFRFVDLYGADKLVK-SMEKFAGAYEAVQ 736
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -2
Query: 356 PPIFGSNFRFSNLFG*CAIIENSLRTFAAEYSALE 252
PP +G FRF +L+G +++ S+ FA Y A++
Sbjct: 729 PPFWGGPFRFVDLYGADKLVK-SMEKFAGAYEAVQ 762
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVC 221
C C L+R + ++ + FH+ C CF+C
Sbjct: 171 CRKCEIPLNREDMVMKAKEMIFHHACFVCFIC 202
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVC 221
C C L+R + ++ + FH+ C CF+C
Sbjct: 171 CRKCEIPLNREDMVMKAKEMIFHHACFVCFIC 202
>Z81532-3|CAC70088.2| 659|Caenorhabditis elegans Hypothetical
protein F36F2.6 protein.
Length = 659
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +1
Query: 244 RKSSRALYSAANVRREFSMIAHQPNKLENLKLEPNIGGRGERNEARIRRNLIIVDRVITK 423
R R S ANV SMI H P + + L IG E N R+ +++VD T
Sbjct: 99 RAGQRKEQSTANV----SMIHHVPELIVSDTLAKEIGSADENNLITNRKLVLLVDLDQTI 154
Query: 424 LTARRKPFAI 453
+ KP +
Sbjct: 155 IHTSDKPMTV 164
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCS 224
C C ++LH + +++ G S+H C KC CS
Sbjct: 131 CAACDQALHSGQ-VLLALGLSWHVYCFKCSECS 162
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCS 224
C C ++LH + +++ G S+H C KC CS
Sbjct: 117 CAACDQALHSGQ-VLLALGLSWHVYCFKCSECS 148
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCS 224
C C ++LH + +++ G S+H C KC CS
Sbjct: 131 CAACDQALHSGQ-VLLALGLSWHVYCFKCSECS 162
>Z81546-1|CAB04449.2| 859|Caenorhabditis elegans Hypothetical
protein F53A2.1 protein.
Length = 859
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 600 TYRSVLSKTVHC*SGLTAPELPLSLYPCRCKLFLWVDYSFL 478
T+ S++ C L +P PL P RC F W ++SFL
Sbjct: 35 TFSSIILSLYFC-GPLVSPMGPL---PARCDTFFWGNFSFL 71
>Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 482 FSFFVCHNNRIANGLRLAVNFVITRSTIIRFLLIRASFRSPRP 354
FS+F+C+ N N L A+ R T +R ++R F++ RP
Sbjct: 561 FSYFLCYINSTINPLCYALCNARFRHTYMR--ILRCKFKAERP 601
>Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 482 FSFFVCHNNRIANGLRLAVNFVITRSTIIRFLLIRASFRSPRP 354
FS+F+C+ N N L A+ R T +R ++R F++ RP
Sbjct: 535 FSYFLCYINSTINPLCYALCNARFRHTYMR--ILRCKFKAERP 575
>U39998-7|AAK71422.2| 100|Caenorhabditis elegans Hypothetical
protein ZK622.4 protein.
Length = 100
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 120 EVCDHCHESLHRNEDI-VVWEGYSFHNRCHKCFVC 221
E C C + N+ + + +G FH C KC++C
Sbjct: 3 EPCFRCKRPTYFNDKMGPLKDGSMFHKGCFKCWIC 37
>AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic
acetylcholine receptorlarge isoform protein.
Length = 611
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 482 FSFFVCHNNRIANGLRLAVNFVITRSTIIRFLLIRASFRSPRP 354
FS+F+C+ N N L A+ R T +R ++R F++ RP
Sbjct: 561 FSYFLCYINSTINPLCYALCNARFRHTYMR--ILRCKFKAERP 601
>AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 482 FSFFVCHNNRIANGLRLAVNFVITRSTIIRFLLIRASFRSPRP 354
FS+F+C+ N N L A+ R T +R ++R F++ RP
Sbjct: 561 FSYFLCYINSTINPLCYALCNARFRHTYMR--ILRCKFKAERP 601
>AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 482 FSFFVCHNNRIANGLRLAVNFVITRSTIIRFLLIRASFRSPRP 354
FS+F+C+ N N L A+ R T +R ++R F++ RP
Sbjct: 535 FSYFLCYINSTINPLCYALCNARFRHTYMR--ILRCKFKAERP 575
>AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic
acetylcholine receptor protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 482 FSFFVCHNNRIANGLRLAVNFVITRSTIIRFLLIRASFRSPRP 354
FS+F+C+ N N L A+ R T +R ++R F++ RP
Sbjct: 535 FSYFLCYINSTINPLCYALCNARFRHTYMR--ILRCKFKAERP 575
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSET 230
C C+E + + + + +H C +CF+C +
Sbjct: 107 CSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRS 141
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 27.5 bits (58), Expect = 9.1
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = +3
Query: 126 CDHCHESLHRNEDIVVWEGYSFHNRCHKCFVCSET 230
C C+E + + + + +H C +CF+C +
Sbjct: 107 CSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRS 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,768,913
Number of Sequences: 27780
Number of extensions: 271105
Number of successful extensions: 919
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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