Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i07
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 36 0.035
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 34 0.081
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 34 0.081
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 33 0.19
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 32 0.43
AC024791-7|AAU20833.1| 278|Caenorhabditis elegans Hypothetical ... 31 0.57
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 31 0.99
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.99
AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical ... 30 1.3
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 30 1.7
Z83228-5|CAB05731.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 2.3
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 29 3.0
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 29 3.0
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 29 3.0
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 29 3.0
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 29 3.0
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81530-5|CAB04309.2| 287|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 29 4.0
Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical pr... 28 5.3
L14331-3|AAA28096.1| 180|Caenorhabditis elegans Hypothetical pr... 28 5.3
AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical... 28 5.3
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC024791-31|AAF60655.1| 181|Caenorhabditis elegans Hypothetical... 28 7.0
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 28 7.0
Z92829-6|CAB07346.1| 214|Caenorhabditis elegans Hypothetical pr... 27 9.2
U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter... 27 9.2
U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter... 27 9.2
AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical... 27 9.2
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Frame = +3
Query: 537 FRLPQNVKPENYYLNITPFFL-------ENNFTFQGEVTILLTVFNETNEII 671
+RLP+NV P Y L+IT F E +FTF G+V I + V ET+ I+
Sbjct: 30 YRLPRNVFPTEYRLHITTFLPGYKWEADEKSFTFIGDVKIQIEVKEETDTIV 81
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 35.5 bits (78), Expect = 0.035
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = +3
Query: 510 DTNLETPKEFRLPQNVKPENYYLNITPFFL-------ENNFTFQGEVTILLTVFNETNEI 668
D + +RLP++V P +Y ++I + EN TF+G V ILL + T+++
Sbjct: 21 DARIADVASYRLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNILLDIKETTDKL 80
Query: 669 I 671
+
Sbjct: 81 V 81
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 34.3 bits (75), Expect = 0.081
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 321 NVTKYELCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIE-KVKDAE 491
N+ K+E +AE K SL +T K++ K RN+ N+K +A S+ E+E K+K+AE
Sbjct: 773 NLKKFE-AEIAELKASLEKTEKELTKYRNL-YNEKLTAISDKENRSQIEMEHKLKNAE 828
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 34.3 bits (75), Expect = 0.081
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 321 NVTKYELCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIE-KVKDAE 491
N+ K+E +AE K SL +T K++ K RN+ N+K +A S+ E+E K+K+AE
Sbjct: 785 NLKKFE-AEIAELKASLEKTEKELTKYRNL-YNEKLTAISDKENRSQIEMEHKLKNAE 840
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +3
Query: 345 RVAEAKLSLNETNKDIPKDRNIEANDKKSATERN--IAISKNEIEKVK--DAEGKDVMND 512
++AE K N+ N+ I + ++ KKSA E N A+S +E VK + K++ ND
Sbjct: 1232 QIAELKEKQNQLNESIHRTLDLAEEQKKSADEANNLAAVSLTNVEAVKIPSVDPKELRND 1291
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 31.9 bits (69), Expect = 0.43
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +3
Query: 426 KSATERNIAISKNEIEKVKDAEGKDVMNDTNLETPKEFRLPQNVKPENYYLNITPFFL-- 599
KS RN + E E V A+ +D N+ E RLP +V P +Y L + +
Sbjct: 41 KSQYSRNDPHDEIESENVPAAKPED-----NISA-SELRLPTSVSPISYQLTVKTYLPGY 94
Query: 600 -----ENNFTFQGEVTILLTVFNETNEI 668
+NN TF+G+V I L + ++
Sbjct: 95 GYTADKNNLTFEGQVLIELNITKSIKKV 122
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.43
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +3
Query: 426 KSATERNIAISKNEIEKVKDAEGKDVMNDTNLETPKEFRLPQNVKPENYYLNITPFFL-- 599
KS RN + E E V A+ +D N+ E RLP +V P +Y L + +
Sbjct: 53 KSQYSRNDPHDEIESENVPAAKPED-----NISA-SELRLPTSVSPISYQLTVKTYLPGY 106
Query: 600 -----ENNFTFQGEVTILLTVFNETNEI 668
+NN TF+G+V I L + ++
Sbjct: 107 GYTADKNNLTFEGQVLIELNITKSIKKV 134
>AC024791-7|AAU20833.1| 278|Caenorhabditis elegans Hypothetical
protein Y47G6A.15 protein.
Length = 278
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 354 EAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDA 488
EAKL+ ++ N D KD AN ++ E + +++E+EK K+A
Sbjct: 120 EAKLTSSDANLDRAKDEVETANRRQKRAEDDAKDARDELEKEKNA 164
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 30.7 bits (66), Expect = 0.99
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +3
Query: 402 RNIEANDKKSATE-----RNIAISKNEIEKVKDAEGKDVMNDTNLETPKEFRLPQNVKPE 566
+N E KSA E +N S + + + + E D T +E LP+NV+P
Sbjct: 104 QNYEMMQFKSANESMTTCKNFTRSHKKHQDIVNEEDADENASIKQPTKEELALPKNVQPV 163
Query: 567 NYYLNITPFFLENNFTFQGEVTILLTVFNETNEII 671
Y ++++P + N T G + L + TN+I+
Sbjct: 164 WYDVSLSP-KVGGNGT-MGLAHVKLNIEEPTNKIV 196
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 285 NFAACPKTDQLANVTKYELCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKN 464
+F + P +V K C E + E NKD KD+ E + + + ++ I+ +
Sbjct: 527 DFESSPSASPALSVDKENECEKKEDESKTKEKNKDKEKDKEKEKSVDEHTNDLDVPINPD 586
Query: 465 EIEKVKDAEGK 497
+ E + DA K
Sbjct: 587 DAE-MADANDK 596
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 30.7 bits (66), Expect = 0.99
Identities = 20/85 (23%), Positives = 39/85 (45%)
Frame = +3
Query: 318 ANVTKYELCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGK 497
AN + ++ A KL+++E K N ++ NI ++NE E+ ++
Sbjct: 810 ANSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAERREILENIIKTENESEEDEEVPND 869
Query: 498 DVMNDTNLETPKEFRLPQNVKPENY 572
+ +ND + +EF L Q + E +
Sbjct: 870 EDINDILSRSEEEFELFQKMDQERF 894
>AL032632-5|CAA21585.1| 297|Caenorhabditis elegans Hypothetical
protein Y11D7A.9 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 536 FFRCLQIC-IVHDVFT-FCIFDFLYFILTYSYISFCC*FLIVSLYIPVFRYIFISFI 372
FF IC IVH + FC LY++ Y +S+ L SLY+ + SFI
Sbjct: 174 FFYVFGICGIVHMISNIFCHAHSLYYLNPYGRLSYYLKILFTSLYVLSTPILIASFI 230
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 323 ISQLISFRAGSEIVHQKR*RHQSQ 252
I QL+S R SE++HQ+ RHQ +
Sbjct: 634 IQQLVSLRETSEVMHQESARHQEE 657
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 396 KDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLETPKEFRLPQNVKPE 566
K+ EA K E + + + E+E+ E + V + +E + +LP+ VK E
Sbjct: 265 KEEAAEAAAKLIQAENEMVVEEEEVEEPPVVEQEQVPKEKEVEVAEAEKLPEQVKTE 321
>Z83228-5|CAB05731.1| 148|Caenorhabditis elegans Hypothetical
protein F52F12.5 protein.
Length = 148
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +3
Query: 360 KLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVM---NDTNLETP 530
+LSL+E + + + + + N+KKS+TE SK ++ A+ K +M + E
Sbjct: 15 ELSLSEDDDPVKEKKKSKGNEKKSSTESKSKESKETSKEEDLAQKKFLMTQKTQSMTEDE 74
Query: 531 KEF--RLPQNVKPE 566
KE + P++ KP+
Sbjct: 75 KEVKPKAPESQKPK 88
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical protein
T05A12.4b protein.
Length = 975
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 369 LNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKV---KDAEGK--DVMNDTNLETPK 533
+++ +K K +N+ + +ERN +++ EIE++ KDA+ DV + +ET +
Sbjct: 833 IHQISKKYMKSKNLNLDPTSRKSERNGRVNEREIEEITRPKDAKRSRLDVEEEDEMETNE 892
Query: 534 E 536
E
Sbjct: 893 E 893
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 369 LNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKV---KDAEGK--DVMNDTNLETPK 533
+++ +K K +N+ + +ERN +++ EIE++ KDA+ DV + +ET +
Sbjct: 833 IHQISKKYMKSKNLNLDPTSRKSERNGRVNEREIEEITRPKDAKRSRLDVEEEDEMETNE 892
Query: 534 E 536
E
Sbjct: 893 E 893
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 540 RLPQNVKPENYYLNITPFFLENNFTFQGEVTILLTVFNETN 662
RLP +P +Y + ++P N F+F G TI +T+ T+
Sbjct: 15 RLPTFAEPTHYNVRLSPCL--NQFSFDGHATIDVTIKEATD 53
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 540 RLPQNVKPENYYLNITPFFLENNFTFQGEVTILLTVFNETN 662
RLP +P +Y + ++P N F+F G TI +T+ T+
Sbjct: 79 RLPTFAEPTHYNVRLSPCL--NQFSFDGHATIDVTIKEATD 117
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 348 VAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLET 527
V E KL LN T I K+ +E + ++NE+ + ++ ++TN ET
Sbjct: 132 VEEIKLELNGT---IKKENGVETDPTTPTCSME---AENEVCETPAVVSVEIRDETNGET 185
Query: 528 PKEFRLPQNVKPEN 569
+ + +NV+P++
Sbjct: 186 NSDLKDDENVEPDS 199
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 348 VAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLET 527
V E KL LN T I K+ +E + ++NE+ + ++ ++TN ET
Sbjct: 644 VEEIKLELNGT---IKKENGVETDPTTPTCSME---AENEVCETPAVVSVEIRDETNGET 697
Query: 528 PKEFRLPQNVKPEN 569
+ + +NV+P++
Sbjct: 698 NSDLKDDENVEPDS 711
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 348 VAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLET 527
V E KL LN T I K+ +E + ++NE+ + ++ ++TN ET
Sbjct: 647 VEEIKLELNGT---IKKENGVETDPTTPTCSME---AENEVCETPAVVSVEIRDETNGET 700
Query: 528 PKEFRLPQNVKPEN 569
+ + +NV+P++
Sbjct: 701 NSDLKDDENVEPDS 714
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +3
Query: 369 LNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLETPKE 536
LN K + RN++ + K ER+++ EIEK + E DV D N P E
Sbjct: 723 LNLERKLLMTTRNMKEDTMKDRMERHVSFGDTEIEKYEVVEEGDV--DGNDMDPSE 776
>Z81530-5|CAB04309.2| 287|Caenorhabditis elegans Hypothetical
protein F36D1.6 protein.
Length = 287
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 447 IAISKNEIEKVKDAEGKDVMN---DTNLETPKEFRLPQNVKPENYYLN 581
+ +S + K+ + E KD ++ + +LETP + NVKP N L+
Sbjct: 12 LLVSASHSGKLSEEENKDRLSSCGNVHLETPSDSNASANVKPANVALS 59
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 348 VAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLET 527
V E KL LN T I K+ +E + ++NE+ + ++ ++TN ET
Sbjct: 647 VEEIKLELNGT---IKKENGVETDPTTLTCSME---AENEVCETPAVVSVEIRDETNGET 700
Query: 528 PKEFRLPQNVKPEN 569
+ + +NV+P++
Sbjct: 701 NSDLKDDENVEPDS 714
>Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical
protein C53B4.3 protein.
Length = 415
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 502 TSLPSASLTFSISFLLIAIFLSVADFLSLASIFLSLGISLLVSLRDSLASATLQSS 335
T L SL+F I + L L + F+SLG+S++ + DSL +A + S
Sbjct: 293 TLLIIGSLSFVIGYTLFTFVFFNFWMLLVIMPFVSLGMSVVATCADSLLTALVDES 348
>L14331-3|AAA28096.1| 180|Caenorhabditis elegans Hypothetical
protein K12H4.4 protein.
Length = 180
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = +3
Query: 321 NVTKYELCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKD 500
NV + + VAE K +NE N+ + DR +E D+ E + K++ + D G +
Sbjct: 81 NVKQLFVYLVAEYKSKVNEVNQVVLWDRIVERADRVVMDEIGV---KSKYYFLDD--GTN 135
Query: 501 VMNDTNLETPKEFRLPQNVKPENYYLNI 584
++N N+ F L NV P + YL +
Sbjct: 136 LLNHKNV----TFVLRYNVIPNSGYLRL 159
>AF016684-13|AAB66203.1| 470|Caenorhabditis elegans Hypothetical
protein F45C12.3 protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +3
Query: 336 ELCRVAEAKLSLNETNKDIPKDRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDT 515
EL ++ E K+ + P+ N E K+ + +I + ++E + +D E K+ +N
Sbjct: 375 ELAQLNELKVLSQPKRSEKPEKPN-EYERSKNLDDGSIKLEEHE-DLEEDKELKEFVNPG 432
Query: 516 NLETPKEFRLPQNVKPE 566
P E L + KPE
Sbjct: 433 KFNRPSELELEKLGKPE 449
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 399 DRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLETPKE--FRLPQNVKPENY 572
D +N +S E ISKN + + D +ND L+ PK+ F L Q+ E
Sbjct: 494 DHQNSSNIAESLEELTTKISKNNTDTCSK-KNVDSINDPRLQEPKQFIFILEQHSGNEQI 552
Query: 573 YLNIT 587
Y +T
Sbjct: 553 YKTLT 557
>AC024791-31|AAF60655.1| 181|Caenorhabditis elegans Hypothetical
protein Y47G6A.3 protein.
Length = 181
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 462 NEIEKVKDAEGKDVMNDTNLETPKEFRLPQNVK 560
+ + + K+ + K N N +TPK+ ++P+N K
Sbjct: 121 DRMNEKKEEDAKTPKNSKNSKTPKKAKMPKNAK 153
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 271 RFWCTISLPALKLISWLMSQNTNS 342
RFWC + AL L +L+S N N+
Sbjct: 681 RFWCKVVGAALDLDQYLLSDNNNN 704
>Z92829-6|CAB07346.1| 214|Caenorhabditis elegans Hypothetical
protein F10A3.7 protein.
Length = 214
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/31 (25%), Positives = 21/31 (67%)
Frame = -2
Query: 497 FTFCIFDFLYFILTYSYISFCC*FLIVSLYI 405
+ + +F F F + YS+++F C ++++++I
Sbjct: 43 YKYLMFSFSSFTIVYSFVNFWCKPVVINVHI 73
>U00036-3|AAT92065.1| 529|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform b protein.
Length = 529
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 310 SVLGQAAKLYTKSDDVTKVSTNITNINRTNGFDRMIPLSVFVVPSTTFNGSCVCIDKSPL 131
S++ +K ++K DD+ +ST +T+ +T G + + + + + S VC K P
Sbjct: 277 SIMHYRSKAFSKFDDLYTISTYVTDYQKTIGQRDQLSFNDIRLMNKIY-CSAVCPSKLPC 335
Query: 130 AR 125
R
Sbjct: 336 QR 337
>U00036-2|AAK29859.1| 592|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 31, isoform a protein.
Length = 592
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 310 SVLGQAAKLYTKSDDVTKVSTNITNINRTNGFDRMIPLSVFVVPSTTFNGSCVCIDKSPL 131
S++ +K ++K DD+ +ST +T+ +T G + + + + + S VC K P
Sbjct: 277 SIMHYRSKAFSKFDDLYTISTYVTDYQKTIGQRDQLSFNDIRLMNKIY-CSAVCPSKLPC 335
Query: 130 AR 125
R
Sbjct: 336 QR 337
>AF003384-11|AAL08042.1| 487|Caenorhabditis elegans Hypothetical
protein K07B1.7b protein.
Length = 487
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 372 NETNKDIPK----DRNIEANDKKSATERNIAISKNEIEKVKDAEGKDVMNDTNLETPKEF 539
N DIP+ DR +D T ++ S N++ + + + DVM + N+ TP ++
Sbjct: 116 NSAGVDIPRRCFVDRLKVQSDDSEGTSNSL--STNDLNDMIELKPPDVMPNGNIGTPSQY 173
Query: 540 RLPQ 551
L Q
Sbjct: 174 FLEQ 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,755,802
Number of Sequences: 27780
Number of extensions: 276713
Number of successful extensions: 1015
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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