Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i06
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 33 0.24
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 29 2.2
Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical pr... 29 3.9
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 28 5.1
U41996-8|AAA83477.1| 310|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 489 KHIVDVFYKKMGSEFTIKDYRDDSTKEISDYKLCYDKSKNKISEN--INETTL 641
KH+ VF ++ GSE T+++ DD K ISD+ KS ++++ +N TL
Sbjct: 347 KHLCHVFKQEFGSEKTVEEIDDDLGKLISDFTSRVMKSNIVLNDDRLMNAITL 399
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 489 KHIVDVFYKKMGSEFTIKDYRDDSTKEISDYKLCYDKSKNKISEN--INETTL 641
KH+ VF ++ GSE T+++ DD K ISD+ KS ++++ +N TL
Sbjct: 347 KHLCHVFKQEFGSEKTVEEIDDDLGKLISDFTSRVMKSNIVLNDDRLMNAITL 399
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +2
Query: 65 IIHFRL*FRINSSKNHNQIHNNSSDWGINGFYKLKDKI*TNHEIYSEKQYKMLHRNNTAN 244
+IHF L F INS K + N+ + +NG +K + + + SEK+ K RN N
Sbjct: 1157 LIHFLLAFEINSEK---VLETNAKNKKLNGLHKAE----ASSVVKSEKEKKKNKRNTADN 1209
>Z69302-3|CAA93266.1| 442|Caenorhabditis elegans Hypothetical
protein F40F8.8 protein.
Length = 442
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 423 LSNNYEGSGDLKRHKSDTIVLDKHI-VDVFYKKMGSEFTIKDYRDDSTKEISDYKL 587
L Y+G G+ + +K + IVL + + V + +++GS KD+R S I+D L
Sbjct: 340 LGQVYDGEGE-EINKEEEIVLYRPVYVKLADRRIGSPHVSKDFRSGSFTRIADSSL 394
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 174 KFKPIMKSIQRSNTKCCIEIIPQIKSIENFNNLKWDEDPLIEYTIPITYK 323
+FK I + R N C + + Q+K +EN L + +PL Y+ TY+
Sbjct: 206 QFKGISSLMIRKNKLNCWQDVRQLKKLENLTVLTMEMNPL--YSSDYTYR 253
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 342 NEQTKYTYKDDSNKFYYSCVD--LLIPSALSNNYEGSGDLKRHKSDTIVLDKHIVDVFYK 515
N++ ++ Y D NK Y+ D + +SNN S D+K +I LDK + K
Sbjct: 360 NDKIEFEYSDHRNKRRYAIFDRETMEKYLISNN---SIDVK-----SINLDKRLSVFSVK 411
Query: 516 KMGSEFTIKDYRDDSTKEISDYKLCYDKSKNKIS 617
K +KD R+ +I D + + +KN+++
Sbjct: 412 KAPKLRALKDNRNFDKIDIFDEGISENDAKNEVA 445
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +3
Query: 342 NEQTKYTYKDDSNKFYYSCVD--LLIPSALSNNYEGSGDLKRHKSDTIVLDKHIVDVFYK 515
N++ ++ Y D NK Y+ D + +SNN S D+K +I LDK + K
Sbjct: 360 NDKIEFEYSDHRNKRRYAIFDRETMEKYLISNN---SIDVK-----SINLDKRLSVFSVK 411
Query: 516 KMGSEFTIKDYRDDSTKEISDYKLCYDKSKNKIS 617
K +KD R+ +I D + + +KN+++
Sbjct: 412 KAPKLRALKDNRNFDKIDIFDEGISENDAKNEVA 445
>U41996-8|AAA83477.1| 310|Caenorhabditis elegans Hypothetical
protein F38E1.3 protein.
Length = 310
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 252 IENFNNLKWDEDPLIEYTIPITYKIVFKKANEQTKYTYKDDSNKFYYSCVDLLIPSAL 425
I N N LK P + T K ++ + +KDD ++Y +DL++P L
Sbjct: 179 INNQNKLK---TPRVTIRFKGTLKFASLSCHKGIEMGWKDDCESWFYMLLDLIVPFGL 233
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 543 DYRDDSTKEISDYKLCYDKSKNKISENINETTLIIDD 653
+Y+DD K IS K + +S ++N L++DD
Sbjct: 170 EYKDDKKKTISKKKWSLKFAMKDLSAHLNGKKLVLDD 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,113,188
Number of Sequences: 27780
Number of extensions: 247950
Number of successful extensions: 862
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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