Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29i06
(659 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 3.4
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 3.4
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 3.4
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 3.4
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 3.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 6.0
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 22 6.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 7.9
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +2
Query: 35 KILNYELNYNIIHFRL 82
KI+N + N+N ++FR+
Sbjct: 390 KIINNDFNFNDVNFRI 405
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 306 IPITYKIVFKKANEQTKYTYKDDSNKFYYSCVDL 407
IP+ Y + +Q Y +D YY+ V+L
Sbjct: 194 IPVNYSALLSHDEQQLSYFTQDIGLAAYYAQVNL 227
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 172 IFKLVKSIDTPI*RIIMYLIVILR*INSKL 83
IFK++KS + I R I+ + +I + SKL
Sbjct: 62 IFKIIKSTNEKITRYIIRMFLISQQKTSKL 91
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 172 IFKLVKSIDTPI*RIIMYLIVILR*INSKL 83
IFK++KS + I R I+ + +I + SKL
Sbjct: 45 IFKIIKSTNEKITRYIIRMFLISQQKTSKL 74
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 35 KILNYELNYNIIHFRL 82
KI N +LN+N ++FR+
Sbjct: 382 KIANGDLNFNEVNFRI 397
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +2
Query: 308 TDHVQNCIQESKRTNKI 358
T +++C+++ KR NKI
Sbjct: 1304 TSIIKDCVEDMKRGNKI 1320
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 552 DDSTKEISDYKLCYDKSKNKISENINETTLIID 650
D T+ +SD + + K +S+ I++ + +ID
Sbjct: 338 DRRTRHLSDRVVALEAEKKNLSKVIDQHSQLID 370
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 342 NEQTKYTYKDDSNKFYYS 395
N KY Y ++ K YY+
Sbjct: 93 NNNYKYNYNNNCKKLYYN 110
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 325 LYSRKQTNKQNIHIRMILTNFITHA 399
L+S+ K+N I M +F+T+A
Sbjct: 371 LFSKYDAKKRNFFITMFDLDFLTNA 395
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 274 NGMKIR*SNIQYRSRTKLYSRKQTNKQNIHIRMILTNFITHASIY 408
NG I IQYR + + +N + R ++TN + +S+Y
Sbjct: 1525 NGCPILYFTIQYRPINEFHWTLVSNSVKMQRRFVVTN-LQPSSVY 1568
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 274 NGMKIR*SNIQYRSRTKLYSRKQTNKQNIHIRMILTNFITHASIY 408
NG I IQYR + + +N + R ++TN + +S+Y
Sbjct: 1521 NGCPILYFTIQYRPINEFHWTLVSNSVKMQRRFVVTN-LQPSSVY 1564
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 326 NFVRDRYCIFD*RIFIPFQIIKIFNTL 246
NF+ +C+ D + IPF I++ N +
Sbjct: 281 NFILHLFCLLDVQWRIPFNGIQMPNLM 307
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,823
Number of Sequences: 438
Number of extensions: 3466
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -