Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29i05
         (469 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039050-2|AAC47935.1|  499|Caenorhabditis elegans Cytochrome p4...    30   0.95 
Z81047-1|CAB02827.1|  490|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AF106591-2|AAC78238.1|  263|Caenorhabditis elegans Hypothetical ...    28   2.9  
AF067950-6|AAG24156.2|  372|Caenorhabditis elegans Serpentine re...    28   3.8  
AF016445-3|AAC69063.2|  372|Caenorhabditis elegans Serpentine re...    28   3.8  
Z81449-2|CAD88214.1|  459|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z81449-1|CAB03763.1|  473|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AC024817-55|AAF59563.3|  366|Caenorhabditis elegans Hypothetical...    27   6.7  
Z73105-2|CAA97439.2|  803|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AL032640-5|CAA21644.1|  475|Caenorhabditis elegans Hypothetical ...    27   8.9  

>AF039050-2|AAC47935.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 34A5 protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 0.95
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 325 PPPILYRSSY--GYSVHIRRANWFNHTFPFHFFKYL 224
           P PI++ + Y   Y  H++RAN F H F      Y+
Sbjct: 72  PIPIVFIADYDIAYETHVKRANVFGHRFTIGGMDYI 107


>Z81047-1|CAB02827.1|  490|Caenorhabditis elegans Hypothetical
           protein C41G6.1 protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -1

Query: 325 PPPILYRSSY--GYSVHIRRANWFNHTFPFHFFKYLNRS*CKSIHSPNVAV-NESNSINI 155
           P PI++ + Y   Y  H+++AN F H F      Y+     + I   N A   E     +
Sbjct: 72  PIPIVFIADYDIAYETHVKKANIFGHRFTTGVMNYIREG--RGIIGSNGAFWQEHRRFAL 129

Query: 154 RSLDRFG 134
            +L  FG
Sbjct: 130 TTLRNFG 136


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 287 RIPITTSIEYGWWMQDAEVTNASWYKLEKRYPQPASPNTLILDKVR 424
           RIP        WW Q  E+ N+S + L   Y Q  +PN  I  K+R
Sbjct: 118 RIPKVCPEAKQWWTQFHELYNSSLHYLHGLYSQLDNPNCNIEIKMR 163


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 287 RIPITTSIEYGWWMQDAEVTNASWYKLEKRYPQPASPNTLILDKVR 424
           RIP        WW Q  E+ N+S + L   Y Q  +PN  I  K+R
Sbjct: 184 RIPKVCPEAKQWWTQFHELYNSSLHYLHGLYSQLDNPNCNIEIKMR 229


>Z48809-1|CAA88745.1| 1299|Caenorhabditis elegans Hypothetical protein
            T01E8.3 protein.
          Length = 1299

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 161  NTIRFIDCYIGRVNGFALGSIEIFKKMKRKGVIKPVGPSDMYRIPITTSI 310
            NT +F   Y  R+N   +G   + +K K KG+  P    ++  +P  T +
Sbjct: 1050 NTEKFATAYPIRLNVQVIGGRHLSRKDKNKGICSPFVEIEIIGMPCDTKV 1099


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 2    EFFGITSHGPQNYIKECLREIYKEPMTKQDCVNLMKIIEQKSLLPKTI 145
            +FF     G Q+  + C +E+  EP+T  D   ++K ++      K I
Sbjct: 1256 DFFDSALQGNQHLKRYCAKEMASEPITSDDNELIIKYVQSGGFQSKKI 1303


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +2

Query: 2    EFFGITSHGPQNYIKECLREIYKEPMTKQDCVNLMKIIEQKSLLPKTI 145
            +FF     G Q+  + C +E+  EP+T  D   ++K ++      K I
Sbjct: 1256 DFFDSALQGNQHLKRYCAKEMASEPITSDDNELIIKYVQSGGFQSKKI 1303


>AF106591-2|AAC78238.1|  263|Caenorhabditis elegans Hypothetical
           protein T01A4.2 protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
 Frame = +2

Query: 8   FGITSHGPQNYIKECLREIYKEPMTKQDCVNLMKIIEQKSLLPKTIQRPDVNTIRF---- 175
           F  +SH  +      L  +Y+E +   + VNL   I + S L   I  P+V   +     
Sbjct: 63  FLFSSHKVKPLADLALERVYREGILPNNSVNL---IYRDSKLSDAIG-PNVAVEQLLRKQ 118

Query: 176 IDCYIGRVNGFALGSIEIFKKMKRKG--VIKPVG 271
           IDC IG   G+AL  +       + G  +I P+G
Sbjct: 119 IDCIIGYAYGYALAPVARMSPYWKNGIPIITPIG 152


>AF067950-6|AAG24156.2|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein122 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -1

Query: 253 TFPFHFFKYLNRS*CKSIHSPNVAVNESNSINIRSLDRFGK*GFLFNYFH 104
           TFP   FK+L     +S+   + A N++  +N+ S       G +  YF+
Sbjct: 172 TFPISMFKFLENEFIESLPRDSCAPNKTYIVNVLSELFMKNDGVIMEYFY 221


>AF016445-3|AAC69063.2|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein133 protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -3

Query: 194 SQCSSQ*I**Y*HQVSGSFWEVRIFVQLFSLNLHNLVLSLAPYI-FPVSTLL 42
           S+C+S+ +  Y H VS  FW+   F+   S     +V  + P I FP+ T++
Sbjct: 192 SECNSKGVISYGHVVSKLFWQNDEFLLKISTFTTAIVSHIIPCILFPIITII 243


>Z81449-2|CAD88214.1|  459|Caenorhabditis elegans Hypothetical
           protein C46F11.2b protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 361 IPRSIRHFCILHPPPILYRSSYGYSVHIRRANW 263
           +P+ + + C LH   I   + YG+ V + + +W
Sbjct: 50  VPKKVMYNCSLHAEFIRDHADYGFDVTLNKFDW 82


>Z81449-1|CAB03763.1|  473|Caenorhabditis elegans Hypothetical
           protein C46F11.2a protein.
          Length = 473

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -1

Query: 361 IPRSIRHFCILHPPPILYRSSYGYSVHIRRANW 263
           +P+ + + C LH   I   + YG+ V + + +W
Sbjct: 64  VPKKVMYNCSLHAEFIRDHADYGFDVTLNKFDW 96


>AC024817-55|AAF59563.3|  366|Caenorhabditis elegans Hypothetical
           protein Y54G2A.28 protein.
          Length = 366

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 420 TLSSINVFGEAGCGYLFSNLYHEAFVT 340
           TL   N F     GYL S+ YH+ FV+
Sbjct: 195 TLQQYNHFQNYAQGYLVSSTYHQPFVS 221


>Z73105-2|CAA97439.2|  803|Caenorhabditis elegans Hypothetical
           protein R13.4 protein.
          Length = 803

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 239 MKRKGVIKPVGPSDMYRIPITTSIEYGWWMQDAEVTNASWYKLEKRYPQPASPN 400
           M R  V  P GPS M   P    ++YG  M+   V+        ++Y   A PN
Sbjct: 263 MMRMPVQYPSGPSQMAGHPHMQQMQYGHMMRAPPVSVYGQMNNAQQYAVTAHPN 316


>AL032640-5|CAA21644.1|  475|Caenorhabditis elegans Hypothetical
           protein Y43F8A.5 protein.
          Length = 475

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 131 VRIFVQLFSLNLHNLVLSLAPYIFPVSTLLYNF 33
           + +F+  F++ +  L   L+PY F VS ++Y F
Sbjct: 99  IGLFISDFTILIQVLYPRLSPYYFIVSEVIYGF 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,313,904
Number of Sequences: 27780
Number of extensions: 242238
Number of successful extensions: 626
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)