Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29h23
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 140 2e-34
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 75 1e-14
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 60 3e-10
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 49 7e-07
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 39 7e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 38 0.001
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 38 0.002
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 38 0.002
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 36 0.004
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 36 0.004
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 35 0.009
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 34 0.016
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 27 2.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 26 4.2
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 26 5.5
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 5.5
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 25 7.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 140 bits (338), Expect = 2e-34
Identities = 77/156 (49%), Positives = 98/156 (62%), Gaps = 5/156 (3%)
Frame = +3
Query: 195 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISE-DKRYKGMVDAFVRIPKEQG 371
F DF+ GG+SAA+SKTA APIERVKL++Q Q + RYKG+ + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 372 FLSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQ-FWRHFXXXXXXXXXXXX 548
+S WRGN ANV+RYFPTQALNFAFKD +K +F G K + + + F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF--GYKKERDGYAKWFAGNLASGGAAGA 144
Query: 549 TSLCFVYPLDFARTRLAAD---VGKGKDKEFTGLVN 647
SL FVY LD+ARTRLA D KG +++F GLV+
Sbjct: 145 ASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVD 180
Score = 34.3 bits (75), Expect = 0.016
Identities = 31/140 (22%), Positives = 53/140 (37%)
Frame = +3
Query: 195 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGF 374
F + +GG + A S V ++ + L S + ++++ G+VD + + + G
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 375 LSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTS 554
+RG +V+ + L F D K + L G F F S
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG-PLEGNFLASFLLGWAVTTGSGVAS 250
Query: 555 LCFVYPLDFARTRLAADVGK 614
YPLD R R+ G+
Sbjct: 251 ----YPLDTIRRRMMMTSGE 266
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 74.5 bits (175), Expect = 1e-14
Identities = 46/136 (33%), Positives = 71/136 (52%)
Frame = +3
Query: 198 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFL 377
L L+GG++A +S+TAV+P+ER+K+I QVQ+ +K Y + V+I +G +
Sbjct: 21 LISMLSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLI 73
Query: 378 SFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTSL 557
F+RGN N +R FP A+ FA ++ K L+ ++ H S
Sbjct: 74 GFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKN-RSHQNLENH--ERLLFGAIAGAASC 130
Query: 558 CFVYPLDFARTRLAAD 605
YPLD ARTRL+ +
Sbjct: 131 ATTYPLDIARTRLSIE 146
Score = 35.5 bits (78), Expect = 0.007
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 195 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGF 374
F K FL GG + I +T P + ++ QV + YK + A I K +G
Sbjct: 227 FQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGI 282
Query: 375 LSFWRGNLANVIRYFPTQALN-FAFKDVYK 461
F+RG +N+++ P ++ + ++ V K
Sbjct: 283 NGFFRGYSSNMLKIIPVMSITWYTYETVSK 312
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 60.1 bits (139), Expect = 3e-10
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Frame = +3
Query: 186 SYGFL-KDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPK 362
S+ FL K +AGG + ++K+ VAP++RVK++ Q H S + R+ G+ A I
Sbjct: 13 SWEFLVKSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYH 71
Query: 363 EQGFLSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXX 542
G ++G+ A + R FP + F + + + + +++ R F
Sbjct: 72 VYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRD-PEHETHARRF----LSGSLA 126
Query: 543 XXTSLCFVYPLDFARTRLAADVGKGKDKEFT 635
S+ F YPL+ R RLA GK+ T
Sbjct: 127 GTCSVFFTYPLELIRVRLAYITNTGKNPTLT 157
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 48.8 bits (111), Expect = 7e-07
Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Frame = +3
Query: 207 FLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFW 386
F++GGI+ +S+T AP++R+K++L + + S + ++ + G SF+
Sbjct: 131 FISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFF 189
Query: 387 RGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTSLCFV 566
GN NV++ P ++ F + K + G+ + + + F+
Sbjct: 190 VGNGINVLKVMPESSIKFGTYEAMKRVL--GISSSSENHSPLYSYLAGGMAGSVAQM-FI 246
Query: 567 YPLDFARTRL-AADVGKGK 620
YP+D + R+ +D+ +G+
Sbjct: 247 YPVDTLKFRIQCSDLSRGQ 265
Score = 42.7 bits (96), Expect = 5e-05
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +3
Query: 216 GGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFWRGN 395
G +S + T V P+ ++ LQ Q S + Y G +D F + K +GF ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTS---AHPATYDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 396 LANVIRYFPTQALNF-AFKDVYKGIFLE 476
N+++ P+ A+++ +++ K + LE
Sbjct: 399 SPNLLKVAPSVAISYLVYENCKKWLGLE 426
Score = 38.7 bits (86), Expect = 7e-04
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 6/160 (3%)
Frame = +3
Query: 198 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVR-IPKEQGF 374
L +LAGG++ ++++ + P++ +K +Q +S + K ++ + + + K G
Sbjct: 229 LYSYLAGGMAGSVAQMFIYPVDTLKFRIQ----CSDLSRGQHGKSIILSNAKELYKSVGI 284
Query: 375 LSFWRGNLANVIRYFPTQALNF----AFKDVYKGIFLEGVDKNKQFWR-HFXXXXXXXXX 539
++RG L ++ FP A + K + GI + + Q +
Sbjct: 285 RGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGAL 344
Query: 540 XXXTSLCFVYPLDFARTRLAADVGKGKDKEFTGLVNCLIK 659
T V+PL+ RTRL + G ++C K
Sbjct: 345 SGSTGATIVFPLNVIRTRLQTQGTSAHPATYDGFIDCFYK 384
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 38.7 bits (86), Expect = 7e-04
Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 210 LAGGISAAISKTAVAPIERVKLILQVQH-VSKQISEDKRYKGMVDAFVRIPKEQGFLSFW 386
LAG S + + + P++ +K +Q+ + VS+ +S + +V++ ++I +G S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 387 RGNLANVIRYFPTQALNFAFKDVYK 461
RG + ++ P+ A+ F+ + +K
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFK 103
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 38.3 bits (85), Expect = 0.001
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Frame = +3
Query: 198 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVS----KQISEDKR-----YKGMVDAFV 350
L F+AGG++ + A AP++ VK LQ KQ ++ K Y+ +D +
Sbjct: 49 LSHFIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCI 108
Query: 351 ---RIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXX 521
+ +G + +RG N+I P +++NF K I + + ++ +
Sbjct: 109 ILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQE---NSQIH 165
Query: 522 XXXXXXXXXTSLCFVYPLDFARTRLAADVGKGKDKEFTGLVNCLIK 659
+ P+ +TRL D G+ ++ ++C+IK
Sbjct: 166 LMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIK 211
Score = 31.1 bits (67), Expect = 0.15
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 228 AAISKTAVAPIERVKLILQVQ-HVSKQISEDKRYKGMVDAFVRIPKEQGFLSFWRGNLAN 404
A I+K A I +++ + S I+ +Y G++ F + EQG + + G A+
Sbjct: 279 AGIAKFMAAGIAYPHEVVRTRLRQSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAH 338
Query: 405 VIRYFPTQALNFAFKDV 455
++R P + F +V
Sbjct: 339 LLRVVPNACILFGSYEV 355
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 37.5 bits (83), Expect = 0.002
Identities = 41/151 (27%), Positives = 61/151 (40%)
Frame = +3
Query: 207 FLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFW 386
F AG ++ + P++ VK +Q+ V K Y G D +I K +G +
Sbjct: 12 FAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVKNEGPHRLY 65
Query: 387 RGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTSLCFV 566
RG L ++ P +AL FA D Y ++ + V K K T V
Sbjct: 66 RGILPPILMEAPKRALKFASNDTYSKLWRK-VFKRKD--SSPALSILTGSCAGFTETFVV 122
Query: 567 YPLDFARTRLAADVGKGKDKEFTGLVNCLIK 659
P + + RL DV K K + G V+C K
Sbjct: 123 VPFELMKIRL-QDV-KNASK-YNGTVDCFTK 150
Score = 31.9 bits (69), Expect = 0.084
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 210 LAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFWR 389
L G + V P E +K+ LQ + +Y G VD F +I K++ L+ +
Sbjct: 109 LTGSCAGFTETFVVVPFELMKIRLQ------DVKNASKYNGTVDCFTKIVKQERILALYN 162
Query: 390 GNLANVIRY 416
G A + R+
Sbjct: 163 GFEATMWRH 171
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 192 GFLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKR-YKGMVDAFVRIPKEQ 368
G + FL+GG++A + T P E +K Q+Q ++ KR YK + AF I + +
Sbjct: 22 GPVSGFLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHE 81
Query: 369 GFLSFWRG 392
G RG
Sbjct: 82 GIRGLQRG 89
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 324 YKGMVDAFVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLE 476
YK +D ++ + +GF + ++G A++ R P F + +FL+
Sbjct: 266 YKNPIDCILKTIRSEGFFALYKGFGAHLARIAPHTIFCLTFVEQTNKLFLK 316
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 36.3 bits (80), Expect = 0.004
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +3
Query: 198 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKR---YKGMVDAFVRIPKEQ 368
LKD +AGG + S VAP++ VK Q Q K G + + I +
Sbjct: 6 LKDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNE 65
Query: 369 GFLSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDK 488
G +RG ++ Y P+ ++ F + K +F GV+K
Sbjct: 66 GIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNK 103
Score = 25.0 bits (52), Expect = 9.7
Identities = 22/91 (24%), Positives = 33/91 (36%)
Frame = +3
Query: 324 YKGMVDAFVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFW 503
Y DAF +I K +G +F+RG ++ + F + +K + K F
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGKKSNF- 287
Query: 504 RHFXXXXXXXXXXXXTSLCFVYPLDFARTRL 596
H T YP + RTRL
Sbjct: 288 -HIVLAATLSKIAAST---VTYPHEVLRTRL 314
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 36.3 bits (80), Expect = 0.004
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 189 YGFLKDFLAGGISAAISKTAVA-PIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKE 365
+ F KDFLA G+S +++ V P + VK+ LQ Q I Y +D +I K
Sbjct: 15 FSFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKN 68
Query: 366 QGFLSFWRGNL 398
+G +F++G +
Sbjct: 69 EGLAAFYKGTV 79
Score = 29.1 bits (62), Expect = 0.59
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 207 FLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFW 386
+++G IS + V P+E V++ LQ+ Q ++ Y G D +I + G
Sbjct: 116 YVSGAISGLANSFLVGPVEHVRIRLQI-----QTGKNVLYHGPWDCIKKISSQYGLSGIM 170
Query: 387 RG 392
+G
Sbjct: 171 KG 172
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 207 FLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFW 386
FL G ++ I+ PI+ VK +Q +S K YK + +I + G L FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 387 RGNLANVIR 413
G + R
Sbjct: 261 SGATPRLAR 269
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 34.3 bits (75), Expect = 0.016
Identities = 34/131 (25%), Positives = 54/131 (41%)
Frame = +3
Query: 210 LAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFLSFWR 389
LAGGIS+ I + +AP + +K+ +Q+ S + F +++G + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 390 GNLANVIRYFPTQALNFAFKDVYKGIFLEGVDKNKQFWRHFXXXXXXXXXXXXTSLCFVY 569
GN+ + Y A F K + E + N +F TS Y
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL-TENLAMNDHA-VNFLCGTSAGIFATLTS----Y 123
Query: 570 PLDFARTRLAA 602
PLD RT+ A+
Sbjct: 124 PLDTMRTKFAS 134
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +3
Query: 198 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDAFVRIPKEQGFL 377
L L+G I+ A SK + P++ V LQ + YK D F+ I + G
Sbjct: 193 LSSTLSGVIAGAGSKAIMFPVDTVVKTLQ--------TFPSNYKSFKDCFLSIYRNSGIK 244
Query: 378 SFWRGNLANVIRYFP 422
+RG ++++ P
Sbjct: 245 GLYRGLSVSMLKVAP 259
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 225 SAAISKTAVAPIERVKLILQVQHVSKQISEDKRYKGMVDA-FVRIPKEQGFLSFW 386
S + + +A + LIL V+H + SED Y+ +VD F PK+ FW
Sbjct: 18 SILLPRIPLATTKADSLILAVRHDKQVFSED--YRQVVDQYFETSPKKNDIRLFW 70
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 294 VSKQISEDKRYKGMVDAFVRIPKEQGFLSFWRG 392
VSK S K +G A RI KE GF W G
Sbjct: 246 VSKLNSNKKAGEGAGAAAARIYKEIGFSGLWNG 278
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +3
Query: 240 KTAVAPIERVKLILQ---VQHVSKQISEDKRYKGMVDAFVRIPKEQGF 374
+ A PIE +K + V + ++ + +KR +GMVD VRI +E F
Sbjct: 328 RAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEESPF 375
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 73 HPTLLNPDINPWVISYWSVFRE 138
HP NPD P I +W RE
Sbjct: 348 HPAAWNPDNKPQSIVHWDSLRE 369
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 446 ESKIQRLCRKVPYYVSQ 396
+ K LC+KV YYVSQ
Sbjct: 150 QDKYHYLCKKVNYYVSQ 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,534,559
Number of Sequences: 5004
Number of extensions: 46954
Number of successful extensions: 150
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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