Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29h15
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 35 0.063
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 35 0.063
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 35 0.063
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 35 0.063
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 32 0.45
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.78
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.78
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 31 0.78
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 30 1.8
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 29 2.4
U88180-12|AAO21402.1| 476|Caenorhabditis elegans Hypothetical p... 29 3.2
U88180-11|AAO21401.1| 566|Caenorhabditis elegans Hypothetical p... 29 3.2
U88180-10|AAO21403.1| 532|Caenorhabditis elegans Hypothetical p... 29 3.2
U88180-9|AAM22071.1| 517|Caenorhabditis elegans Hypothetical pr... 29 3.2
U88180-8|AAB42296.1| 607|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z92777-5|CAB07171.1| 409|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical p... 29 4.2
Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 29 4.2
AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precur... 29 4.2
AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precur... 29 4.2
Z81094-2|CAB03156.1| 770|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81094-1|CAB03150.1| 784|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 28 5.5
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 28 5.5
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 7.3
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical... 28 7.3
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 27 9.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 9.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 9.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 9.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 9.6
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 27 9.6
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 9.6
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 27 9.6
AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical ... 27 9.6
AL117203-8|CAB55110.1| 376|Caenorhabditis elegans Hypothetical ... 27 9.6
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 27 9.6
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 330 SEIDSEEGTTEM-HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLE 506
+E+D + E+ + +EL ++ +RE + + QL + + + EN+
Sbjct: 651 AELDRQRQRDELDRKAQELSEREMREKERRDRERANEEAQLADLLERERHNQLIRENERR 710
Query: 507 AAMLRFNLVQTENKKIRDEISHMLKDRA 590
A+ R N + E+++ RD++ H++++R+
Sbjct: 711 EAVERANNRRLEDRRSRDKLDHIVRERS 738
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 330 SEIDSEEGTTEM-HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLE 506
+E+D + E+ + +EL ++ +RE + + QL + + + EN+
Sbjct: 651 AELDRQRQRDELDRKAQELSEREMREKERRDRERANEEAQLADLLERERHNQLIRENERR 710
Query: 507 AAMLRFNLVQTENKKIRDEISHMLKDRA 590
A+ R N + E+++ RD++ H++++R+
Sbjct: 711 EAVERANNRRLEDRRSRDKLDHIVRERS 738
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 330 SEIDSEEGTTEM-HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLE 506
+E+D + E+ + +EL ++ +RE + + QL + + + EN+
Sbjct: 651 AELDRQRQRDELDRKAQELSEREMREKERRDRERANEEAQLADLLERERHNQLIRENERR 710
Query: 507 AAMLRFNLVQTENKKIRDEISHMLKDRA 590
A+ R N + E+++ RD++ H++++R+
Sbjct: 711 EAVERANNRRLEDRRSRDKLDHIVRERS 738
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 330 SEIDSEEGTTEM-HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLE 506
+E+D + E+ + +EL ++ +RE + + QL + + + EN+
Sbjct: 651 AELDRQRQRDELDRKAQELSEREMREKERRDRERANEEAQLADLLERERHNQLIRENERR 710
Query: 507 AAMLRFNLVQTENKKIRDEISHMLKDRA 590
A+ R N + E+++ RD++ H++++R+
Sbjct: 711 EAVERANNRRLEDRRSRDKLDHIVRERS 738
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 31.9 bits (69), Expect = 0.45
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = +3
Query: 333 EIDSEEGTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAA 512
E+DS + Q+ K E L + N LDE+ + E+++ TE L +
Sbjct: 64 EVDSVKQALMNQQMITQHLKKRNEYLDDLEEANERIKILDEKLDKLEAKISKTEESLVQS 123
Query: 513 MLRFNLVQTENKKIRDEISHMLKDRAIFNKNWAKMMNS-LSKGKKFLTDLFESST--LAY 683
+ + K IR E+ M +R+ F++ ++ S L K L E + L+Y
Sbjct: 124 VSMLLEKDEQLKTIRKEMKIMDDERSAFDQELTRLKTSRLENEKSSLASRVECTICYLSY 183
Query: 684 D 686
D
Sbjct: 184 D 184
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 324 IKSEIDSEEGTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATEN 497
+KS++ EE TE+ +L ++ +E+ +LK ATT + DE SES EN
Sbjct: 781 VKSQL--EELKTEVERLIRSEEEKTQEIEKLKSAVTATTQERDELTATSESLRTECEN 836
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 324 IKSEIDSEEGTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATEN 497
+KS++ EE TE+ +L ++ +E+ +LK ATT + DE SES EN
Sbjct: 783 VKSQL--EELKTEVERLIRSEEEKTQEIEKLKSAVTATTQERDELTATSESLRTECEN 838
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 324 IKSEIDSEEGTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATEN 497
+KS++ EE TE+ +L ++ +E+ +LK ATT + DE SES EN
Sbjct: 783 VKSQL--EELKTEVERLIRSEEEKTQEIEKLKSAVTATTQERDELTATSESLRTECEN 838
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 31.1 bits (67), Expect = 0.78
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +3
Query: 333 EIDSEEGTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAA 512
E+DS + Q+ K E L + N LDE + E+++ TE L +
Sbjct: 64 EVDSVKQALMNQQMITQHLKKRNEYLDDLEEANERIKILDEELDKLEAKISKTEESLVQS 123
Query: 513 MLRFNLVQTENKKIRDEISHMLKDRAIFNKNWAKMMNS-LSKGKKFLTDLFESST--LAY 683
+ + K IR E+ M +R+ F++ ++ S L K L E + L+Y
Sbjct: 124 VSMLLEKDEQLKTIRKEMKIMDDERSAFDQELTRLKTSRLENEKSSLASRVECTICYLSY 183
Query: 684 D 686
D
Sbjct: 184 D 184
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Frame = +3
Query: 363 MHQLEELF--QKNLREM-LQLKK------ITNATTGQLDERRTQS---ESRLMATENKLE 506
MH E++F Q+ LRE+ L+L + A+ +L+ T S + + + +
Sbjct: 782 MHTKEQVFMLQEKLRELNLELSTKNDEIDMVKASIEELNRNSTASCTSNAEIARLQVSIR 841
Query: 507 AAMLRFNLVQTENKKIRDEISHMLK 581
+ ++ +LV+ EN K+RDE+ M K
Sbjct: 842 NSQIQEDLVKQENTKLRDELQEMQK 866
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 119 ETGASNRSR*TTSDYRSPPTAAKTGHATRNLEERVHKLAERLENRKIRSTQEER*ENEEH 298
E AS+ + +++ + PT T +T EE+ K ER+E R+ R +E+R + +E
Sbjct: 52 EPRASSNNNYSSTSTVAAPTREPTRVSTLKREEKEKKQKERME-RERRELEEKRVQEDEM 110
Query: 299 SKK 307
K+
Sbjct: 111 KKE 113
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +2
Query: 119 ETGASNRSR*TTSDYRSPPTAAKTGHATRNLEERVHKLAERLENRKIRSTQEER*ENEEH 298
E AS+ + +++ + PT T +T EE+ K ER+E R+ R +E+R + +E
Sbjct: 52 EPRASSNNNYSSTSTVAAPTREPTRVSTLKREEKEKKQKERME-RERRELEEKRVQEDEM 110
Query: 299 SKK 307
K+
Sbjct: 111 KKE 113
>U88180-12|AAO21402.1| 476|Caenorhabditis elegans Hypothetical
protein T27A3.1d protein.
Length = 476
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 357 TEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQ 536
T+ LEE KNL ++QLK N +L + + + N EA R +
Sbjct: 56 TKNEFLEESVNKNLDTIVQLKHELNQRI-ELLRVYSHLDDDGLPRSNSDEALRERLKSTK 114
Query: 537 TENKKIRDEISHMLKDRAI 593
+EN+++R E + ++ AI
Sbjct: 115 SENERLRQECDLLRQESAI 133
>U88180-11|AAO21401.1| 566|Caenorhabditis elegans Hypothetical
protein T27A3.1c protein.
Length = 566
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 357 TEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQ 536
T+ LEE KNL ++QLK N +L + + + N EA R +
Sbjct: 56 TKNEFLEESVNKNLDTIVQLKHELNQRI-ELLRVYSHLDDDGLPRSNSDEALRERLKSTK 114
Query: 537 TENKKIRDEISHMLKDRAI 593
+EN+++R E + ++ AI
Sbjct: 115 SENERLRQECDLLRQESAI 133
>U88180-10|AAO21403.1| 532|Caenorhabditis elegans Hypothetical
protein T27A3.1e protein.
Length = 532
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 357 TEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQ 536
T+ LEE KNL ++QLK N +L + + + N EA R +
Sbjct: 97 TKNEFLEESVNKNLDTIVQLKHELNQRI-ELLRVYSHLDDDGLPRSNSDEALRERLKSTK 155
Query: 537 TENKKIRDEISHMLKDRAI 593
+EN+++R E + ++ AI
Sbjct: 156 SENERLRQECDLLRQESAI 174
>U88180-9|AAM22071.1| 517|Caenorhabditis elegans Hypothetical
protein T27A3.1b protein.
Length = 517
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 357 TEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQ 536
T+ LEE KNL ++QLK N +L + + + N EA R +
Sbjct: 97 TKNEFLEESVNKNLDTIVQLKHELNQRI-ELLRVYSHLDDDGLPRSNSDEALRERLKSTK 155
Query: 537 TENKKIRDEISHMLKDRAI 593
+EN+++R E + ++ AI
Sbjct: 156 SENERLRQECDLLRQESAI 174
>U88180-8|AAB42296.1| 607|Caenorhabditis elegans Hypothetical
protein T27A3.1a protein.
Length = 607
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +3
Query: 357 TEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQ 536
T+ LEE KNL ++QLK N +L + + + N EA R +
Sbjct: 97 TKNEFLEESVNKNLDTIVQLKHELNQRI-ELLRVYSHLDDDGLPRSNSDEALRERLKSTK 155
Query: 537 TENKKIRDEISHMLKDRAI 593
+EN+++R E + ++ AI
Sbjct: 156 SENERLRQECDLLRQESAI 174
>Z92777-5|CAB07171.1| 409|Caenorhabditis elegans Hypothetical
protein C17H1.7 protein.
Length = 409
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/80 (20%), Positives = 39/80 (48%)
Frame = +3
Query: 327 KSEIDSEEGTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLE 506
K + E E+ + ++ + R+ +++ + + +L +R+T+ E + + +
Sbjct: 15 KEREEKEARDAELQRKMQVEDQERRDECNRQRMRDLRSSELSQRKTEEER----ADIQRQ 70
Query: 507 AAMLRFNLVQTENKKIRDEI 566
AA+ + +TEN K DE+
Sbjct: 71 AALEQLQATKTENNKREDEL 90
>Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.7 protein.
Length = 596
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 27 LYYSNMESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGV 170
+Y+S +GG+ E+ + LN++ D F R+ ++ H GV
Sbjct: 270 MYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGV 317
>Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.5b protein.
Length = 596
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 27 LYYSNMESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGV 170
+Y+S +GG+ E+ + LN++ D F R+ ++ H GV
Sbjct: 270 MYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGV 317
>Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical
protein C26D10.5a protein.
Length = 658
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 27 LYYSNMESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGV 170
+Y+S +GG+ E+ + LN++ D F R+ ++ H GV
Sbjct: 270 MYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGV 317
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = +3
Query: 351 GTTEMHQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNL 530
G + HQ + K+ ++ + +G+ E TQS +L+A ++ +
Sbjct: 361 GHQQQHQHQRRTSKHSATTDSVESTASTQSGERTESSTQSIEADEDIARELDAQLIEESR 420
Query: 531 VQTENKKIRDEISHMLKDRAIFNKN----WAKMMNSLSKGKKFLT 653
+TE K++++E KD + + +AK + + K K LT
Sbjct: 421 RETE-KRVKEEAEQRKKDELLAKLSQIFGYAKSIRVMKKCPKMLT 464
>AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precursor
protein.
Length = 596
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 27 LYYSNMESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGV 170
+Y+S +GG+ E+ + LN++ D F R+ ++ H GV
Sbjct: 270 MYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGV 317
>AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precursor
protein.
Length = 658
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 27 LYYSNMESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGV 170
+Y+S +GG+ E+ + LN++ D F R+ ++ H GV
Sbjct: 270 MYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNGV 317
>Z81094-2|CAB03156.1| 770|Caenorhabditis elegans Hypothetical
protein F58G11.1b protein.
Length = 770
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 45 ESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGVHPQLRRQDMLLGTLKK-- 218
+ G Q E+ + + ED + +Q+ + + L + T VH + ++GTLKK
Sbjct: 625 DDGEQRERIEALLKTIDEDSDGIVDKQLVLEVIELLEKHTDVHVSAAQMASMIGTLKKED 684
Query: 219 EYINLLKDLKIARSG 263
E L ++++ +SG
Sbjct: 685 EVAGLTEEIRKVQSG 699
>Z81094-1|CAB03150.1| 784|Caenorhabditis elegans Hypothetical
protein F58G11.1a protein.
Length = 784
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 45 ESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRLHRTTGVHPQLRRQDMLLGTLKK-- 218
+ G Q E+ + + ED + +Q+ + + L + T VH + ++GTLKK
Sbjct: 625 DDGEQRERIEALLKTIDEDSDGIVDKQLVLEVIELLEKHTDVHVSAAQMASMIGTLKKED 684
Query: 219 EYINLLKDLKIARSG 263
E L ++++ +SG
Sbjct: 685 EVAGLTEEIRKVQSG 699
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 63 EKNDTEILNKLEDERFRLQRQVRVIE 140
+K ++EI L +ER RLQR+ ++E
Sbjct: 272 QKRESEIFQSLVEERERLQREAEIME 297
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 63 EKNDTEILNKLEDERFRLQRQVRVIE 140
+K ++EI L +ER RLQR+ ++E
Sbjct: 272 QKRESEIFQSLVEERERLQREAEIME 297
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 646 NFFPLLREFIIFAQFLLNIALSFN-IWLISSLIFLFSVWTKLNLSMAASSLFSVAISRDS 470
N F L + + Q++ N +S+N I+SL+ + W K L S ++ S+D+
Sbjct: 94 NLFHALHYYFAYTQYIYNFLISYNRFCAITSLLDIEKRW-KPGLIFFNRSYYTYVSSKDN 152
Query: 469 LWV 461
++
Sbjct: 153 FYI 155
>Z50872-3|CAA90756.1| 238|Caenorhabditis elegans Hypothetical
protein C05D12.5 protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 315 LQRIKSEIDSEEGTTEMHQLEELFQKNLREMLQ--LKKITNATTGQLDERRTQSESRLMA 488
++R KS E+ EM ++ + K L E + LK+ N +T D+ ESR +
Sbjct: 87 IERSKSVKVHEDQINEMQEVMDKKVKQLEENYEERLKESGNESTASFDK-----ESRDDS 141
Query: 489 TENKLEAAMLRFNLVQTENKKIRDEISHM 575
E+ +E ++ +K+++ I+HM
Sbjct: 142 LEDFVEVSINEILETAESKRKLKERINHM 170
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 432 ATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQTENKKIRDEISHMLKDRAIFNKN 605
A Q++ERR + ESR +A + + + A +R + ++ E+ L D+ + N
Sbjct: 179 AERSQIEERRREEESRRLAAQRETDEARVRDE--ERRRQETEKEVEKELNDKRTQSMN 234
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 7.3
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 369 QLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLM--ATENKLEAAMLRFNLVQTE 542
QLEEL +KNLR++ L+K + ER QS+ ++ ++ +E +R + +E
Sbjct: 1386 QLEELRKKNLRDVEHLQKQLEESE-VAKERILQSKKKIQQELEDSSMELENVRASHRDSE 1444
Query: 543 NKKIRDEISHMLKDRAIFNK 602
++ + E S M ++R K
Sbjct: 1445 KRQKKFE-SQMAEERVAVQK 1463
>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
protein Y51H7C.11 protein.
Length = 1058
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -2
Query: 665 LEKVRQEFL---PLTKGIHHFRPVFVEYRPVFQH 573
+E++++E PL ++ F P+F+E PVF H
Sbjct: 338 MERMKKELTICYPLLGQVYAFDPIFIEKLPVFAH 371
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/73 (21%), Positives = 40/73 (54%)
Frame = +3
Query: 366 HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQTEN 545
HQL+ + + E+L++++I N + E+R + +++ +N + A L +L+ T
Sbjct: 39 HQLDVMSENAAEEVLKVEQIFNQKRLPIYEKRKKLTTKI---DNFWQTAFLNHHLLSTAI 95
Query: 546 KKIRDEISHMLKD 584
+ ++++ L+D
Sbjct: 96 PEEQEDLLAALRD 108
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/73 (21%), Positives = 40/73 (54%)
Frame = +3
Query: 366 HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQTEN 545
HQL+ + + E+L++++I N + E+R + +++ +N + A L +L+ T
Sbjct: 39 HQLDVMSENAAEEVLKVEQIFNQKRLPIYEKRKKLTTKI---DNFWQTAFLNHHLLSTAI 95
Query: 546 KKIRDEISHMLKD 584
+ ++++ L+D
Sbjct: 96 PEEQEDLLAALRD 108
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +3
Query: 465 QSESRLMATENKLEAAMLRFNLVQTENKKIRDEISHMLKDRAIFNKNWAKMMNSLSKGKK 644
+ ES + A E+ + + + E +K++DE++ MLK + + ++ +K
Sbjct: 1002 ERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERK 1061
Query: 645 FLTDL 659
+ DL
Sbjct: 1062 KIQDL 1066
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +3
Query: 465 QSESRLMATENKLEAAMLRFNLVQTENKKIRDEISHMLKDRAIFNKNWAKMMNSLSKGKK 644
+ ES + A E+ + + + E +K++DE++ MLK + + ++ +K
Sbjct: 1002 ERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERK 1061
Query: 645 FLTDL 659
+ DL
Sbjct: 1062 KIQDL 1066
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +3
Query: 465 QSESRLMATENKLEAAMLRFNLVQTENKKIRDEISHMLKDRAIFNKNWAKMMNSLSKGKK 644
+ ES + A E+ + + + E +K++DE++ MLK + + ++ +K
Sbjct: 762 ERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERK 821
Query: 645 FLTDL 659
+ DL
Sbjct: 822 KIQDL 826
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +3
Query: 465 QSESRLMATENKLEAAMLRFNLVQTENKKIRDEISHMLKDRAIFNKNWAKMMNSLSKGKK 644
+ ES + A E+ + + + E +K++DE++ MLK + + ++ +K
Sbjct: 1002 ERESSINALESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERK 1061
Query: 645 FLTDL 659
+ DL
Sbjct: 1062 KIQDL 1066
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 212 EERVHKLAERLENRKIRSTQEER*ENEEHSK 304
EE + KL E+ E RK+ QEE+ E EE +
Sbjct: 87 EEELKKLKEKQEKRKLEREQEEK-EMEERRR 116
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 212 EERVHKLAERLENRKIRSTQEER*ENEEHSK 304
EE + KL E+ E RK+ QEE+ E EE +
Sbjct: 921 EEELKKLKEKQEKRKLEREQEEK-EMEERRR 950
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 212 EERVHKLAERLENRKIRSTQEER*ENEEHSK 304
EE + KL E+ E RK+ QEE+ E EE +
Sbjct: 87 EEELKKLKEKQEKRKLEREQEEK-EMEERRR 116
>AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical
protein Y116A8C.11 protein.
Length = 281
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 18 YISLYYSNMESGGQDEKNDTEILNKLEDERFRLQRQVRVIEADRL 152
Y+ + +MESG + + TEI+NK +E L+ +V+ +EA L
Sbjct: 135 YLLITMESMESGKLEHEQQTEIMNKDVEE---LKIRVKELEATDL 176
>AL117203-8|CAB55110.1| 376|Caenorhabditis elegans Hypothetical
protein Y48C3A.11 protein.
Length = 376
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 346 SLSISDLILCNRALFRVLFIFLSFFLCAP 260
S+S S L LC L+ F F+S LC P
Sbjct: 60 SMSCSQLALCINFLYSTFFKFMSDQLCQP 88
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/73 (21%), Positives = 40/73 (54%)
Frame = +3
Query: 366 HQLEELFQKNLREMLQLKKITNATTGQLDERRTQSESRLMATENKLEAAMLRFNLVQTEN 545
HQL+ + + E+L++++I N + E+R + +++ +N + A L +L+ T
Sbjct: 39 HQLDVMSENAAEEVLKVEQIFNQKRLPIYEKRKKLTTKI---DNFWQTAFLNHHLLSTAI 95
Query: 546 KKIRDEISHMLKD 584
+ ++++ L+D
Sbjct: 96 PEEQEDLLAALRD 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,587,146
Number of Sequences: 27780
Number of extensions: 288325
Number of successful extensions: 1253
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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