Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29h10
         (619 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0161 + 27108920-27109279,27109479-27109598,27110301-271104...    33   0.18 
07_01_0509 + 3792255-3792661,3792745-3792851,3792949-3793043,379...    31   0.97 
05_03_0460 - 14294931-14295110,14295200-14295234,14295358-142954...    29   3.9  
09_06_0136 - 21074420-21074746,21075905-21077026                       28   5.2  
02_05_0817 + 31994241-31995908                                         27   9.0  
02_05_0336 + 28033315-28033365,28033580-28033585,28033798-280338...    27   9.0  

>01_06_0161 +
           27108920-27109279,27109479-27109598,27110301-27110438,
           27110680-27110784,27110883-27111051,27111507-27111583,
           27111796-27111840,27111984-27112022,27112374-27112457,
           27112846-27112884,27112963-27113025,27113109-27113238,
           27113319-27113374
          Length = 474

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +3

Query: 432 GLGFNVMGGKEQN--SPIYISRIIPGGVADRHGGLKRGDQLLSVNGVSVEGEN 584
           G+G N+    + N  S + +  +I  G A    G+++GD+LLSVNG+ V G++
Sbjct: 171 GIGLNLREIPDGNGSSKLMVLGLILDGPA-HSAGVRQGDELLSVNGIDVMGKS 222


>07_01_0509 +
           3792255-3792661,3792745-3792851,3792949-3793043,
           3793169-3793245,3793334-3793454,3793533-3793592,
           3793672-3793812
          Length = 335

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 459 KEQNSPIYISRIIPGGVADRHGGLKRGDQLLSVNGV 566
           K ++   YI  I+PG  AD+ G  + GD++L+ + V
Sbjct: 103 KGRDGGTYIEAILPGAAADQTGKFEVGDKVLATSAV 138


>05_03_0460 -
           14294931-14295110,14295200-14295234,14295358-14295457,
           14295548-14295669,14296272-14296367,14296489-14298949
          Length = 997

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/39 (35%), Positives = 26/39 (66%)
 Frame = +3

Query: 144 EQLTLARDIKRAIELLEKLQQSGEVPATKLAALQKVLQS 260
           E L   +DI RA++L ++++ SG  P  +L  L+KV+++
Sbjct: 323 EGLCQQKDIARAVKLFKEMKSSGVAPDVRL--LKKVIEA 359


>09_06_0136 - 21074420-21074746,21075905-21077026
          Length = 482

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 416 QFHYSRVSVSFCSSKCGHRCLCSCGSSYVCGALYVYS 306
           Q H+ ++ V  CS     RC+ SC S     ALYV++
Sbjct: 350 QHHFDKLVVPVCSRIA--RCVSSCSSQVAERALYVWN 384


>02_05_0817 + 31994241-31995908
          Length = 555

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 159 ARDIKRAIELLEKLQQSGEVPA--TKLAALQKVLQSDFLNAVREVYE 293
           ARD KRA+++LE++ Q    P   T  AA+     +  ++  R+++E
Sbjct: 268 ARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARDLFE 314


>02_05_0336 +
           28033315-28033365,28033580-28033585,28033798-28033884,
           28034741-28034830,28035736-28037778,28037916-28038062,
           28038148-28038560,28038656-28038755
          Length = 978

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 405 VVELPKTEEGLGFNVMGGKEQNSPIYISRIIPGGVADRHGGLKRGD 542
           + +LPK +   G +V  G      I++   +PG V D HG + + +
Sbjct: 148 ITQLPKQKSSEGLHVAYGATSLKDIFVWGEVPGNVLD-HGDVSKAN 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,860,268
Number of Sequences: 37544
Number of extensions: 237178
Number of successful extensions: 660
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)