Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29h07
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015204-1|AAT94433.1|  249|Drosophila melanogaster RE66462p pro...   116   4e-26
AE014296-3582|AAN12182.1|  211|Drosophila melanogaster CG32441-P...   116   4e-26
AE014296-3581|AAN12181.1|  198|Drosophila melanogaster CG32441-P...   109   4e-24
BT024347-1|ABC86409.1|  258|Drosophila melanogaster IP09454p pro...    71   2e-12

>BT015204-1|AAT94433.1|  249|Drosophila melanogaster RE66462p
           protein.
          Length = 249

 Score =  116 bits (278), Expect = 4e-26
 Identities = 69/189 (36%), Positives = 113/189 (59%), Gaps = 6/189 (3%)
 Frame = +1

Query: 148 FTLIFVVHLTALFASTACIDYDGFLNMKLEHSLNCNDEKFCHRGSITLKSIRTGVPIIDQ 327
           F LIFV+ L +  +S   +++D ++ ++L+HSL  N E F  RG++T+ S+ +G+  ++Q
Sbjct: 29  FVLIFVLGLVS--SSWGFLEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVEQ 86

Query: 328 ILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWI 507
              +   L+ LKKLA  +EFY +K T+     +K  ++++S KA   L+  L+DV+   +
Sbjct: 87  PDLSTADLDLLKKLALGNEFYRLKATVVYSNGAK-AQFITSNKACRLLQAQLNDVLWVSL 145

Query: 508 LPNGAV--IAVNFQVANSTQPLKQATNEYKLNSKF----YLRYIEQAPVPDTASYIQKME 669
            P+G V  I V+   A +T    Q      L ++F     +R+ E APVPDTA +IQK+E
Sbjct: 146 EPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVE 205

Query: 670 RDREARXKG 696
           R+REAR +G
Sbjct: 206 REREARERG 214


>AE014296-3582|AAN12182.1|  211|Drosophila melanogaster CG32441-PA,
           isoform A protein.
          Length = 211

 Score =  116 bits (278), Expect = 4e-26
 Identities = 69/189 (36%), Positives = 113/189 (59%), Gaps = 6/189 (3%)
 Frame = +1

Query: 148 FTLIFVVHLTALFASTACIDYDGFLNMKLEHSLNCNDEKFCHRGSITLKSIRTGVPIIDQ 327
           F LIFV+ L +  +S   +++D ++ ++L+HSL  N E F  RG++T+ S+ +G+  ++Q
Sbjct: 7   FVLIFVLGLVS--SSWGFLEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVEQ 64

Query: 328 ILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWI 507
              +   L+ LKKLA  +EFY +K T+     +K  ++++S KA   L+  L+DV+   +
Sbjct: 65  PDLSTADLDLLKKLALGNEFYRLKATVVYSNGAK-AQFITSNKACRLLQAQLNDVLWVSL 123

Query: 508 LPNGAV--IAVNFQVANSTQPLKQATNEYKLNSKF----YLRYIEQAPVPDTASYIQKME 669
            P+G V  I V+   A +T    Q      L ++F     +R+ E APVPDTA +IQK+E
Sbjct: 124 EPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVE 183

Query: 670 RDREARXKG 696
           R+REAR +G
Sbjct: 184 REREARERG 192


>AE014296-3581|AAN12181.1|  198|Drosophila melanogaster CG32441-PB,
           isoform B protein.
          Length = 198

 Score =  109 bits (262), Expect = 4e-24
 Identities = 62/171 (36%), Positives = 103/171 (60%), Gaps = 6/171 (3%)
 Frame = +1

Query: 202 IDYDGFLNMKLEHSLNCNDEKFCHRGSITLKSIRTGVPIIDQILFNEKHLEALKKLANED 381
           +++D ++ ++L+HSL  N E F  RG++T+ S+ +G+  ++Q   +   L+ LKKLA  +
Sbjct: 10  LEHDSWITVELQHSLAANSESFSFRGNVTIPSLNSGLANVEQPDLSTADLDLLKKLALGN 69

Query: 382 EFYSIKTTITTGENSKGTEYLSSVKAQAFLENGLSDVINAWILPNGAV--IAVNFQVANS 555
           EFY +K T+     +K  ++++S KA   L+  L+DV+   + P+G V  I V+   A +
Sbjct: 70  EFYRLKATVVYSNGAK-AQFITSNKACRLLQAQLNDVLWVSLEPSGYVTGITVSQDTAPA 128

Query: 556 TQPLKQATNEYKLNSKF----YLRYIEQAPVPDTASYIQKMERDREARXKG 696
           T    Q      L ++F     +R+ E APVPDTA +IQK+ER+REAR +G
Sbjct: 129 TIECTQEDVNKLLETQFSTDVLIRHAELAPVPDTAGFIQKVEREREARERG 179


>BT024347-1|ABC86409.1|  258|Drosophila melanogaster IP09454p
           protein.
          Length = 258

 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
 Frame = +1

Query: 271 HRGSITLKSIRTGVPIIDQILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYLSS 450
           H+G+ ++  +   + I+D          + +KLA  +EFY +K T+     +K  ++++S
Sbjct: 84  HQGNFSIAGVSLTLDILDTA-------GSYEKLALGNEFYRLKATVVYSNGAKA-QFITS 135

Query: 451 VKAQAFLENGLSDVINAWILPNGAV--IAVNFQVANSTQPLKQATNEYKLNSKF----YL 612
            KA   L+  L+DV+   + P+G V  I V+   A +T    Q      L ++F     +
Sbjct: 136 NKACRLLQAQLNDVLWVSLDPSGYVTGITVSQDTAPATIECTQEDVNKLLETQFSTDVLI 195

Query: 613 RYIEQAPVPDTASYIQKMERDREARXKG 696
           R+ E APVPDTA +IQK+ER+REAR +G
Sbjct: 196 RHAELAPVPDTAGFIQKVEREREARERG 223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,403,676
Number of Sequences: 53049
Number of extensions: 418855
Number of successful extensions: 1366
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)