Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29g24
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 31 0.81
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 1.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 30 1.4
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical pr... 29 3.3
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 29 3.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.3
Z72517-4|CAA96692.1| 105|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.7
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 28 5.7
U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 28 7.5
AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical pr... 27 9.9
U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL023816-2|CAA19431.1| 355|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 412 RGQPGELFPDKPWKGQQNEPNP-AVVGMSGIQQTPVG--GEPQGQASPGIFNSRGA 570
+G PG P +GQ +P A+VG++G + P G GEP Q PG+ GA
Sbjct: 185 QGPPGSAGRAGP-RGQAGQPGTIAIVGLAG-RPGPQGPLGEPGAQGEPGVDGKDGA 238
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Frame = +1
Query: 388 NGERIVQTRGQPGELFPDKPWKGQ-----QNEPNPAVVGMSGIQQTPVGGEPQGQASPGI 552
N +VQ P + P KP Q Q P PAV + + P +P Q +P +
Sbjct: 279 NPAPVVQQASAPVQQAPPKPVPQQTPPVQQAPPKPAVQ-QAPTRAAPAPPKPAPQQAPPV 337
Query: 553 FNSRGAADGSDISSRRFIDYPAPQMQDSPPTKALHSVPAV*QN 681
+ + PAP +Q +PP P V QN
Sbjct: 338 QQNPPKPAVQQAQAPVVQQAPAPPVQQAPPKPTPQQAPPVRQN 380
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +1
Query: 415 GQPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSD 585
G PGE D P +G +P G SGI P P G A P G A G +
Sbjct: 220 GMPGEPGKDAPQEGSPVPGDPGPPGDSGIPGPP---GPPGMAGPDGIPGMGGAKGQN 273
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 415 GQPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQA-SPGIFNSRGAADGSDIS 591
G PG PD + P G +GI P PQG A + G GA + +
Sbjct: 140 GAPGPAGPDGEAGAPGPDGQPGQDGPAGIDGAPGEAGPQGDAGAAGQDGEAGAPGPAGKN 199
Query: 592 SRRFIDYPAPQMQDSP 639
+R P PQ + P
Sbjct: 200 GQRGQGAPGPQGPEGP 215
>Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical
protein R05D7.5 protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 556 NSRGAADGSDISSRRFIDYPAPQMQDSP 639
N+ G DGS I RR + +P MQ++P
Sbjct: 200 NAMGKLDGSFIKDRRIYNLSSPDMQNTP 227
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Frame = +1
Query: 421 PGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEP-QGQASP-------GIFNSRGAAD 576
P + P W QN+ VG +G++Q PV P QA P G+ +RGA+
Sbjct: 1515 PEDRNPSIVWDSTQNK----YVG-AGVEQEPVAPPPPMAQAGPAPPVGGGGLRAARGASR 1569
Query: 577 GSDI--SSRRFIDYPAPQMQDSPPTKALHSVPAV*QNES 687
+ + +S PA M +PPT +PA N++
Sbjct: 1570 YARVGGTSSSASQAPAGMMAPAPPTANFGFIPAPVDNDN 1608
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = +1
Query: 415 GQPGELFPDKP--WKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAADGSDI 588
G PG P+ P ++GQ P G+ G TP P G P + R G D
Sbjct: 157 GPPGAPGPNGPPGYEGQMGVP-----GLPGDGPTPGSPGPPGPPGPPGYPGRQGCQGKDG 211
Query: 589 SS----RRFIDYPAPQMQDSPP 642
S RFI P P PP
Sbjct: 212 PSGDPGLRFIKTPGPVGAAGPP 233
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 524 SPPTGVCWMPLIPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGN 345
SP T + +++ + P S ++SP + + +P TSTT + + +
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511
Query: 344 STFSSSMYSWHSSAFS 297
ST SSS+ S SS S
Sbjct: 512 STASSSVSSTASSTQS 527
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 524 SPPTGVCWMPLIPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGN 345
SP T + +++ + P S ++SP + + +P TSTT + + +
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511
Query: 344 STFSSSMYSWHSSAFS 297
ST SSS+ S SS S
Sbjct: 512 STASSSVSSTASSTQS 527
>Z72517-4|CAA96692.1| 105|Caenorhabditis elegans Hypothetical
protein T28F4.5 protein.
Length = 105
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 556 NSRGAADGSDISSRRFIDYPAP-QMQDSPPTKALHSV 663
N ++GSD R IDY P +M+ S PT+A+ V
Sbjct: 38 NDNANSEGSDEVVREIIDYDLPAKMERSYPTEAVKKV 74
>Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical
protein F42A8.1 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 139 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAV-GC 279
+ Y ACV R YQ + W+D + YRC DG+ + GC
Sbjct: 103 EFGYSACVGTDGRT-YQKGETWTDAKNTYYYRCR-DDGRVVKTTIEGC 148
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 229 YRCEIRDGKYFIAAVGCRKPKIPENALECHEYI 327
Y+CEIR GK AVGC I EN + ++ I
Sbjct: 243 YQCEIRPGKRSHRAVGC---SIVENGRDINKVI 272
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 325 IEDENVEFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQ--QNEPNPAVVGMSG 498
IE ENVE T A L+ + N + I+Q + L + KG+ +N +G
Sbjct: 444 IESENVELITRLATLQKIHSENADSILQLESENSRLRREVTEKGELIENLIREKPLGTGF 503
Query: 499 IQQTPVGGEPQGQASP 546
QQ +G P
Sbjct: 504 QQQNNLGSSSSSSVQP 519
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 573 RCSSAVKYSRRRLTLGLATDRCLLDAAHSDNSRIWLVLLALPWFIGEQFARLPSGLHYSL 394
R + ++ + R A RC+L +A+ N++ +LVL WF+ F L S +HY++
Sbjct: 254 RLAMSIGFYRSYTNAHSAVARCML-SANFLNAKAFLVLYW--WFLLVSFISLCSAIHYTI 310
>U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical
protein C24B5.1 protein.
Length = 427
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 390 IYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFW 286
IYF D Q R + IF+ F+A C F W
Sbjct: 140 IYFYDIFQDSLLRNSYYSCIFNTFLAHVCDFASVW 174
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = -1
Query: 576 IRCSSAVKYSRRRLTLGLATDRCLLDAAHSDNSRIWLVLLALPWFIGEQFARLPSGLHY 400
I C A+KYSRR L + TDR +++W + E + P Y
Sbjct: 1019 INCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKY 1077
>AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical
protein T20H9.1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 399 SLSIYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFWFSTSDS 268
SLS+ FD T+ + D++ D F + F WFST+ +
Sbjct: 219 SLSVEFDFFTEENAIKIRDDLMKRDTFRRCEVWFNSSWFSTAQT 262
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +1
Query: 454 GQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRG--AADGSDISSRRFIDYPAPQ 624
G+Q P GI +T G P + +PG G A G+D + F Y AP+
Sbjct: 77 GRQKRQTPQTCCSCGIGETGPAGVPGQEGAPGNDGKAGQPGAPGADADEQGF-HYKAPE 134
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +1
Query: 454 GQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRG--AADGSDISSRRFIDYPAPQ 624
G+Q P GI +T G P + +PG G A G+D + F Y AP+
Sbjct: 77 GRQKRQTPQTCCSCGIGETGPAGVPGQEGAPGNDGKAGQPGAPGADADEQGF-HYKAPE 134
>Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical
protein ZC455.4 protein.
Length = 533
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 344 STFSSSMYSWHSSAFSGIFGFRHPTAAMKYFPSLISHL*R 225
ST + YS+ S ++GF H MKY L +HL R
Sbjct: 11 STLFGNAYSYKFLVISPVYGFSH----MKYMAELANHLAR 46
>U14634-2|AAA21560.2| 423|Caenorhabditis elegans Hypothetical
protein T15B12.2 protein.
Length = 423
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 538 ASPGIFNSRGAADGSDISSRRFIDYPAPQMQDSPPTKALHS 660
AS G+FN +G + + S P P Q PPTK L S
Sbjct: 380 ASEGMFNDKGLTTRTTLVSVELPPPPPPPPQ-KPPTKQLKS 419
>AL023816-2|CAA19431.1| 355|Caenorhabditis elegans Hypothetical
protein T05G11.3 protein.
Length = 355
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 250 GKYFIAAVGCRKPKIPENALECHEYIE-DENVEFPTC-CARLRCVVEVNGERIVQTRGQ 420
GK+ I+ VG KPK+ ++ I + + F C C + GERIVQ R +
Sbjct: 265 GKFIISQVGDDKPKLTLQSMIVGFIINFNSAIHFLLCYCLHNVFTISECGERIVQKRSR 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,654,857
Number of Sequences: 27780
Number of extensions: 416280
Number of successful extensions: 1280
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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