Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29g22
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66499-2|CAA91297.1|  183|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U34955-1|AAC47115.1|  183|Caenorhabditis elegans cyclophilin iso...    30   1.6  
AC006720-2|AAF60445.3|  262|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U64608-5|AAB04596.1|  393|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U41533-11|AAO38614.1|  387|Caenorhabditis elegans Hypothetical p...    27   8.7  
U41533-10|AAA83172.1|  491|Caenorhabditis elegans Hypothetical p...    27   8.7  
U41533-8|AAA83171.2|  588|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p...    27   8.7  
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z66499-2|CAA91297.1|  183|Caenorhabditis elegans Hypothetical
           protein T01B7.4 protein.
          Length = 183

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +3

Query: 522 EFYKFVKSSGRPCTYMHICIDDDHIGTLIFMLYADIAPNTCE 647
           +F + ++    P  ++ +      IGT++  L+AD+ P T E
Sbjct: 6   KFAEQLRHPDNPIVFLEVTAGGAPIGTIVIELFADVTPRTAE 47


>U34955-1|AAC47115.1|  183|Caenorhabditis elegans cyclophilin
           isoform 11 (CYP-11) protein.
          Length = 183

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +3

Query: 522 EFYKFVKSSGRPCTYMHICIDDDHIGTLIFMLYADIAPNTCE 647
           +F + ++    P  ++ +      IGT++  L+AD+ P T E
Sbjct: 6   KFAEQLRHPDNPIVFLEVTAGGAPIGTIVIELFADVTPRTAE 47


>AC006720-2|AAF60445.3|  262|Caenorhabditis elegans Hypothetical
           protein Y17G9B.4 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 552 RPCTYMHICIDDDHIGTLIFMLYADIAPNTCE 647
           R C ++H+ I     G ++  L+ DI P T +
Sbjct: 96  RKCVFIHVSIGGIEEGCIVIQLFNDIVPRTAQ 127


>Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical
           protein K05C4.9 protein.
          Length = 724

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +1

Query: 4   FQNCQ*LQNSLSIKCLCFLLIYRSRKKKLLNIHGLNR*KNIMRISIRLL 150
           F+N + L+  +S   LC L I  +    + ++HGL+  KN+  +SIR L
Sbjct: 168 FENDELLRLCVSFPSLCVLDISGTN---IASLHGLSNLKNLQELSIRYL 213


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical protein
            C28A5.2 protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = +3

Query: 108  KSIKEHHAHIYKIAHNSINNPKYPFKENK--MTKPKDKFTVIGNFVTKEFIYCIRLVQGL 281
            ++I  H+  +  I +N+INN K   ++NK  + K  ++  +     TK+ I+C  +    
Sbjct: 754  RNITPHNVLLRDIIYNNINNRKMFVEQNKNAILKCWNRLPLAQVTRTKK-IFCTVIAVES 812

Query: 282  HKYRKHIFDTPVIRGVTGVEWPAVWNDIKIK 374
             K+    FD   I+G+  V +  V++D+ +K
Sbjct: 813  IKFPPS-FDDTCIKGL--VRFAVVYDDMNVK 840


>Z37983-3|CAA86056.1|  621|Caenorhabditis elegans Hypothetical
           protein B0393.3 protein.
          Length = 621

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 344 ACRLE*YKD*IWRKSILSSITSC 412
           +C L  Y    WR+S++SS+T C
Sbjct: 113 SCSLREYTQWSWRQSVISSVTRC 135


>U64608-5|AAB04596.1|  393|Caenorhabditis elegans Hypothetical
           protein T22B7.7 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +3

Query: 45  MSLFSTYLPQSKKEITQHPWAKSIKEHHAHIYKIAHNSI---NNPKYPFKENKMTKPKDK 215
           MS    + P+   +  +HP  +++ + +   YK A + I   +NPK   +  KM + + K
Sbjct: 17  MSNLKNFRPKYPAQSNRHPEVRTMDQLYDCFYKYARHLITAQSNPKISLESRKMAESELK 76

Query: 216 FTV 224
             +
Sbjct: 77  VVI 79


>U41533-11|AAO38614.1|  387|Caenorhabditis elegans Hypothetical
           protein R05F9.1c protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 174 YPFKENKMTKPKDKFTVIGNFVTKEFIYC 260
           YP  + K+ K  +K  VI N+V + F++C
Sbjct: 243 YPTHKEKIKKRFNKAEVIYNYVQRPFVHC 271


>U41533-10|AAA83172.1|  491|Caenorhabditis elegans Hypothetical
           protein R05F9.1a protein.
          Length = 491

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 174 YPFKENKMTKPKDKFTVIGNFVTKEFIYC 260
           YP  + K+ K  +K  VI N+V + F++C
Sbjct: 347 YPTHKEKIKKRFNKAEVIYNYVQRPFVHC 375


>U41533-8|AAA83171.2|  588|Caenorhabditis elegans Hypothetical
           protein R05F9.1b protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 174 YPFKENKMTKPKDKFTVIGNFVTKEFIYC 260
           YP  + K+ K  +K  VI N+V + F++C
Sbjct: 444 YPTHKEKIKKRFNKAEVIYNYVQRPFVHC 472


>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
           protein F48E3.8a protein.
          Length = 2427

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 412 ATCD*RQYAFPPNLIFISFQTAGHSTPVTPLITGVSNMC 296
           ATC  +    PPNL   +  T G S P   + +GV+  C
Sbjct: 186 ATCFMQTCTCPPNLPVAADGTCGRSCPNNQVYSGVTGEC 224


>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
           protein F48E3.8b protein.
          Length = 1299

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 412 ATCD*RQYAFPPNLIFISFQTAGHSTPVTPLITGVSNMC 296
           ATC  +    PPNL   +  T G S P   + +GV+  C
Sbjct: 186 ATCFMQTCTCPPNLPVAADGTCGRSCPNNQVYSGVTGEC 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,878,869
Number of Sequences: 27780
Number of extensions: 284676
Number of successful extensions: 718
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)