Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29g14
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 146 2e-36
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 133 2e-32
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 129 5e-31
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 100 4e-22
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 98 1e-21
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 81 1e-16
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 38 4e-05
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 43 5e-05
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 40 3e-04
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 29 0.68
SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyce... 29 0.90
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 28 1.2
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 28 1.6
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 2.1
SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces po... 27 2.7
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 27 3.6
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 3.6
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 27 3.6
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 26 6.3
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 8.4
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 25 8.4
SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|c... 25 8.4
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 146 bits (355), Expect = 2e-36
Identities = 85/212 (40%), Positives = 128/212 (60%), Gaps = 12/212 (5%)
Frame = +2
Query: 104 SLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIG 283
+L DG+ IP LGLGT+ +P ++ VK AL+ GYR ID AA+Y NED++G
Sbjct: 17 TLADGSKIPGLGLGTWRS---------EPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVG 67
Query: 284 AAVRASGIPREDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNPGF 457
++ SG+PR+DI++ +KL + V K LEK+L L + Y+D YLIH PV+F G
Sbjct: 68 DGIKESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGE 127
Query: 458 KGF------DIV----DYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSV 607
F +++ +TWK ME+ G + IG+SNFN T ++RIL+ ++KP+V
Sbjct: 128 DKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAV 187
Query: 608 LQVEVNLHLGQDKLIDYCKRNGIVVMAFSPFG 703
Q+E++ L Q + ++ K+ GI V A+SPFG
Sbjct: 188 HQMELHPFLPQTEFVEKHKKLGIHVTAYSPFG 219
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 133 bits (322), Expect = 2e-32
Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 12/210 (5%)
Frame = +2
Query: 104 SLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIG 283
+L +G+ IP++GLGT+ G+ E K V AL+AGYR IDTA +Y NE +IG
Sbjct: 16 TLPNGDKIPSIGLGTW----RSGKDETK-----NAVCAALKAGYRHIDTAHIYGNEKEIG 66
Query: 284 AAVRASGIPREDIFIVTKLPMDNQRD--VVKQLEKSLARLNMSYVDLYLIHNPVAFNPG- 454
+R SG+PR DI++ +KL + R V LEK+L LN+ Y+D YLIH P A G
Sbjct: 67 EGIRESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGP 126
Query: 455 ------FKG---FDIVDYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSV 607
KG ++ V +TW+ MEE G + IGISNFN +DR+L+ ++KP++
Sbjct: 127 EELPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKPTI 186
Query: 608 LQVEVNLHLGQDKLIDYCKRNGIVVMAFSP 697
Q+E++ +L Q + ++ K+ I V A+SP
Sbjct: 187 HQMELHPYLPQTEYLEKHKKLQIHVSAYSP 216
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 129 bits (311), Expect = 5e-31
Identities = 70/201 (34%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Frame = +2
Query: 125 IPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVRASG 304
+PA G+GT L EKG+ DS VK AL AG+ ID A +Y NE+++G A++ +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDS---VKNALAAGFIHIDCAEVYGNEEEVGVALKEAN 68
Query: 305 IPREDIFIVTKLPMDNQRDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGFDIVDYL 484
+PR +FI +K+ M N ++ + L +SL +L Y+DLYL+H+P+ F +
Sbjct: 69 VPRSKLFITSKV-MHNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYE-----KKIPIS 122
Query: 485 DTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVN--LHLGQDKLIDY 658
+ WK ME A GL S+G+SNF ++ +L+ I P V Q+E + ++ L+++
Sbjct: 123 EGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEF 182
Query: 659 CKRNGIVVMAFSPFGPMFHDS 721
C+ GI+V + P P+ D+
Sbjct: 183 CQSKGIIVEGYGPLSPLVRDA 203
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 99.5 bits (237), Expect = 4e-22
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 6/207 (2%)
Frame = +2
Query: 95 SKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLNED 274
S + LN+G P G+++ K DS V AL+ GYR ID+A +Y NE
Sbjct: 4 SFVKLNNGLKCPQFAYGSYM------VNRTKCFDS---VYAALQCGYRHIDSAQMYHNEA 54
Query: 275 QIGAAV----RASGIPREDIFIVTKL-PMDNQRDVVKQLEKSLARLNMSYVDLYLIHNPV 439
G A+ +G REDI+ +KL + + + ++ S+ + Y+DL+L+H+P
Sbjct: 55 DCGRAILKFMEETGTKREDIWFTSKLNDLSGYKSTLSSIDASVKACGLGYIDLFLLHSPY 114
Query: 440 AFNPGFKGFDIVDYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENG-QIKPSVLQV 616
D +++WK +E+ G ++IG+SNF I +L++ +I P V Q+
Sbjct: 115 G-----------DRIESWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQI 163
Query: 617 EVNLHLGQDKLIDYCKRNGIVVMAFSP 697
E++ Q K++DYC+ GI + A++P
Sbjct: 164 ELHPFCSQQKVVDYCESKGIQLAAYAP 190
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 97.9 bits (233), Expect = 1e-21
Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 6/218 (2%)
Frame = +2
Query: 62 LSEATTGGGKASKISLNDGNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRL 241
+SE+ T +++ ++L +G IP +G G F+ +K + V AL++GYR
Sbjct: 1 MSESQT---ESTTVTLTNGMVIPRIGFGAFM---------LKYNECYGLVTQALDSGYRH 48
Query: 242 IDTAALYLNEDQIGAAV----RASGIPREDIFIVTKLP-MDNQRDVVKQLEKSLARLNMS 406
IDTAA+Y NED G A+ + + R DIF+ +KL + + SL L +
Sbjct: 49 IDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCSDYYSTRAAIRSSLHHLG-T 107
Query: 407 YVDLYLIHNPVAFNPGFKGFDIVDYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRI-LE 583
Y+DL+LI +P G K + +WK MEE + G +S+G+SN+ + +
Sbjct: 108 YIDLFLIQSPAG---GKK-----SRIASWKAMEEFVDSGDIRSVGVSNYGVKHLQELYAS 159
Query: 584 NGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVVMAFSP 697
N + P V Q+E++ L QD ++ YC+ + I + A+SP
Sbjct: 160 NPKFYPCVNQIELHPFLSQDDIVKYCQSHDIAIEAYSP 197
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 81.4 bits (192), Expect = 1e-16
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Frame = +2
Query: 194 DSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVRAS-----GIPREDIFIVTKLPMDNQ- 355
D + V AL G R+ID+A Y NE + A++ I REDI ++TK+P Q
Sbjct: 25 DCYQQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQG 84
Query: 356 -RDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGFDIVDYLDTWKGMEEAKNLGLAK 532
K +E+SL R +D+ LIH+P P V +++W+ + + + G
Sbjct: 85 FERTWKAVEQSLRRTGRPKLDVVLIHSPKW--P-------VRRIESWRALLQHQKEGRIN 135
Query: 533 SIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVVMAFSP 697
IG+SN+N ++ I+ G P++ QVE + + + YC +GI+V AFSP
Sbjct: 136 KIGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSP 190
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 37.9 bits (84), Expect(2) = 4e-05
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +2
Query: 110 NDGNSIPALGLGTF-LGFDEKGQKEVKPGDSE--KPVKWALEAGYRLIDTAALY---LNE 271
N G + L LG G E + V + E K +K A +AG R DTA Y ++E
Sbjct: 14 NSGLKVSKLILGCMSYGKKEYWEDWVLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSE 73
Query: 272 DQIGAAVRASGIPREDIFIVTKLPMDNQRDVVK 370
+ +G +R IPR I I++K ++D++K
Sbjct: 74 ELVGKFIRKYEIPRSSIVILSKCFFPVRKDLIK 106
Score = 24.6 bits (51), Expect(2) = 4e-05
Identities = 25/118 (21%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +2
Query: 350 NQRDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGFDIVDYLDTWKGMEEAKNLGLA 529
+++ + +E S+ RL +Y+D+ IH ++P +++ L+ + + +G A
Sbjct: 131 SRKHIFDAVEDSVKRLG-TYIDVLQIHR---YDPHVSAEEVMRALNDVVESGKVRYIG-A 185
Query: 530 KSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDK--LIDYCKRNGIVVMAFSP 697
++ F Q + ++G K +Q NL +++ +I YC++ G+ ++ +SP
Sbjct: 186 STMRCYQFIELQ-NTAEKHGWHKFISMQNYHNLLYREEEREMIPYCQKTGVGLIPWSP 242
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 42.7 bits (96), Expect = 5e-05
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Frame = +2
Query: 116 GNSIPALGLGTFLGFDEKGQKEVKPGDSEKPVKWALEAGYRLIDTAALYLN---EDQIGA 286
G + A LG +L + +G +V+ ++ +K A + G DTA +Y N E +G
Sbjct: 22 GLKVSAFSLGGWLTYGNEGY-DVE--HTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGK 78
Query: 287 AVRASGIPREDIFIVTK--------LPMD---NQRDVVKQLEKSLARLNMSYVDLYLIHN 433
A++ G R + I TK LP +++ +++ L SL RL + YVD+ + H
Sbjct: 79 AIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHR 138
Query: 434 P 436
P
Sbjct: 139 P 139
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 467 DIVDYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEV--NLHLGQ 640
+I ++DTWK +EE G ++G+S F ++ R++ + + P Q+ + N L
Sbjct: 154 EIQSWVDTWKLLEEKVGEGKIGTLGVSEFGVNELQRLISSVNVVPESTQINIGQNCKLPN 213
Query: 641 DKLIDYCKRNGIVVMAFSPFGPMFHDS 721
D L+++ R+ + + S + +S
Sbjct: 214 D-LLNFADRHHLKLFFHSDPSALLSES 239
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.68
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 467 DIVDYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEV 622
+ +D W EEAK L L KS S+F+T ++ + + S +Q E+
Sbjct: 377 ETIDRRKLWTNEEEAKLLDLVKSSYRSSFHTKKMTSLFTHNNHTTSNIQREI 428
>SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 28.7 bits (61), Expect = 0.90
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 524 LAKSIGISNFNTTQIDRILENGQI--KPSVLQVEVNLHLGQDKLIDYCKRNGIVVMAFSP 697
L + G+ N N +++ + +G I + + ++ ++HL D+ ++ K+N + +F P
Sbjct: 26 LTDNFGMGNANRVNLNQQVLDGSISFRDAFAKMLDSVHLSYDEALEVLKKNVAIDPSFKP 85
Query: 698 F 700
F
Sbjct: 86 F 86
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 407 YVDLYLIHNPVAFNPGFKGFDIVDYLDTWKGMEEAKNLGLA 529
Y+ + H+P +F GFKGF V ++ + + +N+G A
Sbjct: 240 YIGAHYWHHPGSFRNGFKGFCSV-FISSAYSLSGTENIGTA 279
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 200 EKPVKWALEAGYRLIDTAALYLNEDQI-GAAVRASGIPREDIFIVTKLPMDNQRDVVKQL 376
+KP+ W GY ++T + E R + I R+ + V +L N D++K +
Sbjct: 241 DKPIPWRGRLGYACLNTILRSMKERVFCSRTCRITTIQRDGLESVKQLGTQNVLDLIKLV 300
Query: 377 E 379
E
Sbjct: 301 E 301
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 338 LPMDNQRDVVKQLEKSLARLNM 403
LP+DN +++KQL +S RLN+
Sbjct: 1151 LPLDNSSELLKQLPESEKRLNV 1172
>SPAC9E9.11 |plr1|plr|pyridoxal reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 333
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 488 TWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLH---LGQDKLIDY 658
T K ++ + G +G+S + I R + + + ++VE +L + + ++D
Sbjct: 134 TMKTLKGFVDSGKISCVGLSEVSAETIKRA--HAVVPIAAVEVEYSLFSRDIETNGIMDI 191
Query: 659 CKRNGIVVMAFSPF 700
C++ I ++A+SPF
Sbjct: 192 CRKLSIPIIAYSPF 205
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 624 FTSTCKTEGFIWPFSNILSICVVLKLDMPIDLARPRFLASSMPFQVS 484
F++T + F SNI S +L D P+ +++ FL + F++S
Sbjct: 87 FSTTKSAKSFSSTSSNIDSNLDLLNYDTPLTISKISFLLQQLEFKLS 133
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 26.6 bits (56), Expect = 3.6
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Frame = +2
Query: 161 DEKGQKEVKPG--DSEKPVKWALEAGYRLIDTAALYLNEDQIGAAVRASGIPREDIFIVT 334
D K +KP ++ ++ A E G +++ A +YL Q G A+ A + I T
Sbjct: 81 DAKQSDRIKPDVPKTQSRIRQAYE-GLSILNEAEVYLKNKQAGLALNALDRLQRRIDSTT 139
Query: 335 KLPM------------DNQRDVVKQLEKSLARLNMSYVDLYLIHNPVAFNPGFKGFDIVD 478
+ PM N D +++ + RLN V+ ++ V + G I
Sbjct: 140 QPPMSWMYLKAQVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITH 199
Query: 479 YLDTWK 496
+ + K
Sbjct: 200 FQEALK 205
>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
Aif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 29 IVFVITTLIVHLSEATTGGGKASKISLNDGNSIPA 133
I F + I + ++ KA I L DG SIPA
Sbjct: 356 IAFYLENSIKEVKTSSNDSSKAEHIVLKDGQSIPA 390
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 FDEKGQKEVKPGDSEK-PVKWALEAGYRLIDTAALYLNEDQIGAAV 292
F K +K P +E+ PVKW+L R+ + L ++G AV
Sbjct: 1358 FKTKSRKGPSPSWNEEIPVKWSLGDELRISAVTSNLLGHTKLGEAV 1403
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 570 SICVVLKLDMPIDLARPRFLASSMPFQVSK*S-TMSKPLNPGLKATGLCIKYRST*LMF 397
++ ++ K P D P F SMP Q S S ++ LN +K + KYR +F
Sbjct: 44 NVSMISKFQAPEDKFFPSFSLKSMPKQSSHMSASLLNSLNTSMKKSFSRKKYREAVSLF 102
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 476 DYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKL 649
D+L++W + A GL++ + I + +D + +G V LHL DKL
Sbjct: 397 DFLNSWTPLMLASATGLSEIVSILVASGASVDEVDSSGWTAMEQAVVRGYLHLA-DKL 453
>SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 473
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 62 LSEATTGGGKASKISLNDGNSIPALGL 142
L + + GG S I LN+GN I A L
Sbjct: 303 LLDGSVGGDPESDILLNEGNDIEATSL 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,078,582
Number of Sequences: 5004
Number of extensions: 64677
Number of successful extensions: 209
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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