SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29f19
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058730-1|AAL13959.1|  399|Drosophila melanogaster LD47536p pro...   165   4e-41
AJ012460-1|CAA10031.1|  399|Drosophila melanogaster glutamine sy...   165   4e-41
AE014134-43|AAF51546.1|  399|Drosophila melanogaster CG2718-PC, ...   165   4e-41
AE014134-42|AAF51547.1|  399|Drosophila melanogaster CG2718-PB, ...   165   4e-41
X52760-1|CAA36971.1|  399|Drosophila melanogaster glutamine synt...   160   1e-39
BT023772-1|AAZ41780.1|  369|Drosophila melanogaster LP04559p pro...   156   2e-38
AE014298-1617|AAN09632.1|  369|Drosophila melanogaster CG1743-PC...   156   2e-38
AE014298-1616|AAF48043.2|  369|Drosophila melanogaster CG1743-PB...   156   2e-38
X52759-1|CAA36970.1|  365|Drosophila melanogaster glutamine synt...   142   3e-34
AE014298-1618|AAS65314.1|  266|Drosophila melanogaster CG1743-PA...    73   4e-13
AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein ...    34   0.14 
BT001498-1|AAN71253.1|  484|Drosophila melanogaster LD33682p pro...    31   1.8  
AY051688-1|AAK93112.1|  477|Drosophila melanogaster LD23642p pro...    31   1.8  
AF079101-1|AAD12369.1|  477|Drosophila melanogaster arginine-tRN...    31   1.8  
AE013599-2977|AAF57497.3|  484|Drosophila melanogaster CG9204-PB...    31   1.8  
AE013599-2975|AAF57496.3|  477|Drosophila melanogaster CG9204-PA...    31   1.8  
X94264-1|CAA63940.1|  571|Drosophila melanogaster calcium /calmo...    30   2.3  
U53190-1|AAC80169.1|  897|Drosophila melanogaster Camguk protein.      30   2.3  
AE014297-3042|AAF55922.2|  898|Drosophila melanogaster CG6703-PB...    30   2.3  
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    29   5.4  
BT001868-1|AAN71638.1|  538|Drosophila melanogaster SD03344p pro...    29   7.1  

>AY058730-1|AAL13959.1|  399|Drosophila melanogaster LD47536p
           protein.
          Length = 399

 Score =  165 bits (401), Expect = 4e-41
 Identities = 74/142 (52%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           + NL  P N++ ATY+WID +G N+R KDR+LDK P  +E +P W YDGSST Q+  ++S
Sbjct: 52  YRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENS 111

Query: 396 EITLLPVAVYRDPFRKSPH-IIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIE 572
           + TL P A+YRDPF+   + +IVLC+TYS++G PT +N R +    +  I DQEPWFGIE
Sbjct: 112 DTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNKRAAFQAAIDLISDQEPWFGIE 171

Query: 573 QEYTMFDRDHWPLGWPKPRGYP 638
           QEYT+ D D  P GWP+  G+P
Sbjct: 172 QEYTLLDVDGRPFGWPE-NGFP 192


>AJ012460-1|CAA10031.1|  399|Drosophila melanogaster glutamine
           synthetase I protein.
          Length = 399

 Score =  165 bits (401), Expect = 4e-41
 Identities = 74/142 (52%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           + NL  P N++ ATY+WID +G N+R KDR+LDK P  +E +P W YDGSST Q+  ++S
Sbjct: 52  YRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENS 111

Query: 396 EITLLPVAVYRDPFRKSPH-IIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIE 572
           + TL P A+YRDPF+   + +IVLC+TYS++G PT +N R +    +  I DQEPWFGIE
Sbjct: 112 DTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNKRAAFQAAIDLISDQEPWFGIE 171

Query: 573 QEYTMFDRDHWPLGWPKPRGYP 638
           QEYT+ D D  P GWP+  G+P
Sbjct: 172 QEYTLLDVDGRPFGWPE-NGFP 192


>AE014134-43|AAF51546.1|  399|Drosophila melanogaster CG2718-PC,
           isoform C protein.
          Length = 399

 Score =  165 bits (401), Expect = 4e-41
 Identities = 74/142 (52%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           + NL  P N++ ATY+WID +G N+R KDR+LDK P  +E +P W YDGSST Q+  ++S
Sbjct: 52  YRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENS 111

Query: 396 EITLLPVAVYRDPFRKSPH-IIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIE 572
           + TL P A+YRDPF+   + +IVLC+TYS++G PT +N R +    +  I DQEPWFGIE
Sbjct: 112 DTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNKRAAFQAAIDLISDQEPWFGIE 171

Query: 573 QEYTMFDRDHWPLGWPKPRGYP 638
           QEYT+ D D  P GWP+  G+P
Sbjct: 172 QEYTLLDVDGRPFGWPE-NGFP 192


>AE014134-42|AAF51547.1|  399|Drosophila melanogaster CG2718-PB,
           isoform B protein.
          Length = 399

 Score =  165 bits (401), Expect = 4e-41
 Identities = 74/142 (52%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           + NL  P N++ ATY+WID +G N+R KDR+LDK P  +E +P W YDGSST Q+  ++S
Sbjct: 52  YRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENS 111

Query: 396 EITLLPVAVYRDPFRKSPH-IIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIE 572
           + TL P A+YRDPF+   + +IVLC+TYS++G PT +N R +    +  I DQEPWFGIE
Sbjct: 112 DTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNKRAAFQAAIDLISDQEPWFGIE 171

Query: 573 QEYTMFDRDHWPLGWPKPRGYP 638
           QEYT+ D D  P GWP+  G+P
Sbjct: 172 QEYTLLDVDGRPFGWPE-NGFP 192


>X52760-1|CAA36971.1|  399|Drosophila melanogaster glutamine
           synthetase protein.
          Length = 399

 Score =  160 bits (389), Expect = 1e-39
 Identities = 72/142 (50%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           + NL  P N++ ATY+WID +G N+R KDR+LDK P  +E +P W YDGSST Q+  ++S
Sbjct: 52  YRNLETPANRVQATYLWIDGTGENIRLKDRVLDKVPSSVEDLPDWQYDGSSTYQAHGENS 111

Query: 396 EITLLPVAVYRDPFRKSPH-IIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIE 572
           + TL P A+YRDPF+   + +IVLC+TYS++G PT +N R +    +  I DQEPWFGIE
Sbjct: 112 DTTLKPRAIYRDPFKPGKNDVIVLCDTYSADGKPTASNKRAAFQAAIDLISDQEPWFGIE 171

Query: 573 QEYTMFDRDHWPLGWPKPRGYP 638
           QEYT+  R     GWP+  G+P
Sbjct: 172 QEYTLLRRGRTSFGWPE-NGFP 192


>BT023772-1|AAZ41780.1|  369|Drosophila melanogaster LP04559p
           protein.
          Length = 369

 Score =  156 bits (379), Expect = 2e-38
 Identities = 71/141 (50%), Positives = 96/141 (68%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           +L+LP  +N + ATYVWID +G +LR KDR LD  P   + +P W+YDGSS  Q++  +S
Sbjct: 22  YLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNS 81

Query: 396 EITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQ 575
           +  L PVA+Y+DPFR+  +I+V+C+TY  +G PT TN R +     +K   +EPWFGIEQ
Sbjct: 82  DTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQ 141

Query: 576 EYTMFDRDHWPLGWPKPRGYP 638
           EYT  D D  PLGWPK  G+P
Sbjct: 142 EYTFLDFDGHPLGWPK-NGFP 161


>AE014298-1617|AAN09632.1|  369|Drosophila melanogaster CG1743-PC,
           isoform C protein.
          Length = 369

 Score =  156 bits (379), Expect = 2e-38
 Identities = 71/141 (50%), Positives = 96/141 (68%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           +L+LP  +N + ATYVWID +G +LR KDR LD  P   + +P W+YDGSS  Q++  +S
Sbjct: 22  YLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNS 81

Query: 396 EITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQ 575
           +  L PVA+Y+DPFR+  +I+V+C+TY  +G PT TN R +     +K   +EPWFGIEQ
Sbjct: 82  DTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQ 141

Query: 576 EYTMFDRDHWPLGWPKPRGYP 638
           EYT  D D  PLGWPK  G+P
Sbjct: 142 EYTFLDFDGHPLGWPK-NGFP 161


>AE014298-1616|AAF48043.2|  369|Drosophila melanogaster CG1743-PB,
           isoform B protein.
          Length = 369

 Score =  156 bits (379), Expect = 2e-38
 Identities = 71/141 (50%), Positives = 96/141 (68%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           +L+LP  +N + ATYVWID +G +LR KDR LD  P   + +P W+YDGSS  Q++  +S
Sbjct: 22  YLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNS 81

Query: 396 EITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQ 575
           +  L PVA+Y+DPFR+  +I+V+C+TY  +G PT TN R +     +K   +EPWFGIEQ
Sbjct: 82  DTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQ 141

Query: 576 EYTMFDRDHWPLGWPKPRGYP 638
           EYT  D D  PLGWPK  G+P
Sbjct: 142 EYTFLDFDGHPLGWPK-NGFP 161


>X52759-1|CAA36970.1|  365|Drosophila melanogaster glutamine
           synthetase protein.
          Length = 365

 Score =  142 bits (345), Expect = 3e-34
 Identities = 65/131 (49%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
 Frame = +3

Query: 216 FLNLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYDGSSTGQSDLKDS 395
           +L+LP  +N + ATYVWID +G +LR KDR LD  P   + +P W+YDGSS  Q++  +S
Sbjct: 22  YLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNS 81

Query: 396 EITLLPVAVYRDPFRKSPHIIVLCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQ 575
           +  L PVA+Y+DPFR+  +I+V+C+TY  +G PT TN R +     +K   +EPWFGIEQ
Sbjct: 82  DTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQ 141

Query: 576 EYTM-FDRDHW 605
           EYT  FD  HW
Sbjct: 142 EYTSDFDGHHW 152


>AE014298-1618|AAS65314.1|  266|Drosophila melanogaster CG1743-PA,
           isoform A protein.
          Length = 266

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 31/59 (52%), Positives = 38/59 (64%)
 Frame = +3

Query: 462 LCETYSSEGLPTPTNHRVSSAITLSKICDQEPWFGIEQEYTMFDRDHWPLGWPKPRGYP 638
           +C+TY  +G PT TN R +     +K   +EPWFGIEQEYT  D D  PLGWPK  G+P
Sbjct: 1   MCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQEYTFLDFDGHPLGWPK-NGFP 58


>AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein
           protein.
          Length = 849

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
 Frame = +3

Query: 45  KLIQKF*TMYCFKTCAKVFRSIFLSKNL-VYKNMKHVYYLSTSSIFGHPGSHDAYYNYFL 221
           ++IQ   T      C K+FRS+ L KN+  Y + K +  L+T     HPG       +  
Sbjct: 680 EMIQNAYTTTMNPKCTKIFRSLVLLKNIPTYASFKEL-ILNTHEKLLHPGIQKTVKLFSE 738

Query: 222 NLPFPKNKIFATYVWIDASGINLRSKDRILDKEPCDLEMVPKWSYD 359
           N  FP +++    +  +    NL   +    + P  +   P+   D
Sbjct: 739 NYYFPNSQLLIQNIINECQVCNLAKTEHRNTEMPMKITPKPEHCRD 784


>BT001498-1|AAN71253.1|  484|Drosophila melanogaster LD33682p
           protein.
          Length = 484

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 378 SDLKDSEITLLPVAVYRDPFRKS-PHIIVLCETY--SSEGLPTPTNHRVSSAITLSKICD 548
           S+     + L  + VY D FR++ P    L + Y  S    P          +  + + +
Sbjct: 230 SETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQN 289

Query: 549 QEPWFGIEQEYTMFDRDHW 605
           ++PW G E  Y  F + +W
Sbjct: 290 EKPWDGPEMGYGSFHQQYW 308


>AY051688-1|AAK93112.1|  477|Drosophila melanogaster LD23642p
           protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 378 SDLKDSEITLLPVAVYRDPFRKS-PHIIVLCETY--SSEGLPTPTNHRVSSAITLSKICD 548
           S+     + L  + VY D FR++ P    L + Y  S    P          +  + + +
Sbjct: 223 SETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQN 282

Query: 549 QEPWFGIEQEYTMFDRDHW 605
           ++PW G E  Y  F + +W
Sbjct: 283 EKPWDGPEMGYGSFHQQYW 301


>AF079101-1|AAD12369.1|  477|Drosophila melanogaster
           arginine-tRNA-protein transferase1 protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 378 SDLKDSEITLLPVAVYRDPFRKS-PHIIVLCETY--SSEGLPTPTNHRVSSAITLSKICD 548
           S+     + L  + VY D FR++ P    L + Y  S    P          +  + + +
Sbjct: 223 SETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQN 282

Query: 549 QEPWFGIEQEYTMFDRDHW 605
           ++PW G E  Y  F + +W
Sbjct: 283 EKPWDGPEMGYGSFHQQYW 301


>AE013599-2977|AAF57497.3|  484|Drosophila melanogaster CG9204-PB,
           isoform B protein.
          Length = 484

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 378 SDLKDSEITLLPVAVYRDPFRKS-PHIIVLCETY--SSEGLPTPTNHRVSSAITLSKICD 548
           S+     + L  + VY D FR++ P    L + Y  S    P          +  + + +
Sbjct: 230 SETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQN 289

Query: 549 QEPWFGIEQEYTMFDRDHW 605
           ++PW G E  Y  F + +W
Sbjct: 290 EKPWDGPEMGYGSFHQQYW 308


>AE013599-2975|AAF57496.3|  477|Drosophila melanogaster CG9204-PA,
           isoform A protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 378 SDLKDSEITLLPVAVYRDPFRKS-PHIIVLCETY--SSEGLPTPTNHRVSSAITLSKICD 548
           S+     + L  + VY D FR++ P    L + Y  S    P          +  + + +
Sbjct: 223 SETNKHRLKLRLIHVYDDEFRRTLPQSFALYKKYQISIHNDPPKDQDAYKEHLQATPLQN 282

Query: 549 QEPWFGIEQEYTMFDRDHW 605
           ++PW G E  Y  F + +W
Sbjct: 283 EKPWDGPEMGYGSFHQQYW 301


>X94264-1|CAA63940.1|  571|Drosophila melanogaster calcium
           /calmodulin dependentprotein kinase protein.
          Length = 571

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 441 KSPHIIVLCETYSSEGL 491
           K PHI+ L ETYSSEG+
Sbjct: 70  KHPHIVELLETYSSEGM 86


>U53190-1|AAC80169.1|  897|Drosophila melanogaster Camguk protein.
          Length = 897

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 441 KSPHIIVLCETYSSEGL 491
           K PHI+ L ETYSSEG+
Sbjct: 70  KHPHIVELLETYSSEGM 86


>AE014297-3042|AAF55922.2|  898|Drosophila melanogaster CG6703-PB,
           isoform B protein.
          Length = 898

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 441 KSPHIIVLCETYSSEGL 491
           K PHI+ L ETYSSEG+
Sbjct: 70  KHPHIVELLETYSSEGM 86


>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = +3

Query: 84  TCAKVFRSIFLSKNL-VYKNMKHVYYLSTSSIFGHPGSHDAYYNYFLNLPFPKNKIFATY 260
           T  KV RS+FL KN+  Y   K +   S   +  HPG       +  N  FP +++    
Sbjct: 730 TYTKVIRSLFLLKNVGSYAEFKEIILQSHEKLL-HPGIQKMTKLFKENHFFPNSQLLIQN 788

Query: 261 VWIDASGINLRSKDRILDKEPCDLEMVPK 347
           +  + +  NL   +    K P  +   P+
Sbjct: 789 IINECNICNLAKTEHRNTKMPLKITPNPE 817


>BT001868-1|AAN71638.1|  538|Drosophila melanogaster SD03344p
           protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 393 NPSDLTVQLNSRHTTISAPFLNHKAPYPI 307
           +P +  + LNS+HT +S  +LN+K    I
Sbjct: 27  SPMNANIHLNSQHTQLSGRYLNNKVSQQI 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,341,701
Number of Sequences: 53049
Number of extensions: 635074
Number of successful extensions: 1480
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -