Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29f17
         (405 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CEP6 Cluster: Putative uncharacterized protein; n=2; ...    32   3.8  
UniRef50_Q8A587 Cluster: Site-specific DNA-methyltransferase; n=...    32   5.0  
UniRef50_Q5B3J3 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  

>UniRef50_Q5CEP6 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 821

 Score = 32.3 bits (70), Expect = 3.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 102 TYIVAFIDAIIVISYVR*FFTLWFTGCFWLRFCWLF 209
           T+I  F+  I++ + +R +  +W T C WL   +LF
Sbjct: 18  TFITTFVLLILINARIRQYALIWMTWCLWLLGSFLF 53


>UniRef50_Q8A587 Cluster: Site-specific DNA-methyltransferase; n=1;
           Bacteroides thetaiotaomicron|Rep: Site-specific
           DNA-methyltransferase - Bacteroides thetaiotaomicron
          Length = 391

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -3

Query: 142 DITIIASINATIYV-NLHMIMQKFEMHTTVTRFLNYVDLFTNSYADII 2
           DI I  SI A  Y+ N++ ++   E+     R L YVD F   Y D+I
Sbjct: 62  DIQIYTSIFANTYLPNINKLINSTELEKIKDRVLFYVDEFYRKYPDLI 109


>UniRef50_Q5B3J3 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1533

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 284 ISCSSDLSRKPVQGTHIALASDMVPKEPTKTQPKASRKP 168
           +S +S + RKP+ G   +  S + P  P + +P ASR P
Sbjct: 718 VSPTSAIPRKPLDGEAASRLSPLKPSSPQQLKPPASRLP 756


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,895,131
Number of Sequences: 1657284
Number of extensions: 7253316
Number of successful extensions: 16833
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16827
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)