Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29f16
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    33   0.003
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.4  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 312 KIDVKSCVKAEPPHPCDPIVPCDPLKQEEGECPTPSLCVEKLKNP 446
           K+D  S +   PP   D  +   P  +EEG    P +CV KL NP
Sbjct: 297 KMDEDSSISGVPPLSIDGALEAGPYSKEEGLLSYPEVCV-KLANP 340


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 285 FCHIYV*KLDCLYNLTILCSSVSVFLIF 202
           FC I    +  +Y LTIL SSV++ + F
Sbjct: 37  FCRILKYFIIAIYVLTILTSSVTLHVCF 64


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 459 EITKCLPGKFINVTSCAKEDPPH 527
           E+   LPG + N +S    +P H
Sbjct: 102 EVAPVLPGNYANASSVGSRNPIH 124


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 459 EITKCLPGKFINVTSCAKEDPPH 527
           E+   LPG + N +S    +P H
Sbjct: 335 EVAPVLPGNYANASSVGSRNPIH 357


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 459 EITKCLPGKFINVTSCAKEDPPH 527
           E+   LPG + N +S    +P H
Sbjct: 335 EVAPVLPGNYANASSVGSRNPIH 357


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 321 VKSCVKAEPPHPCDPIV 371
           ++ CV A  P  CDP++
Sbjct: 482 MRICVSAWNPKDCDPLI 498


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 554 GPYKEAPLFGPSIVC 598
           GP +    FGPSI C
Sbjct: 49  GPGQSGQCFGPSICC 63


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 549 NTDLTKRRPCSDPPLCVQRI 608
           NTD     PC +   CV RI
Sbjct: 106 NTDDCSPNPCRNNGSCVDRI 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,886
Number of Sequences: 336
Number of extensions: 4041
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)