Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29f15
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67954-8|AAB52608.2|  782|Caenorhabditis elegans Sulfate permeas...    28   6.1  
AY954524-1|AAX34432.2|  762|Caenorhabditis elegans anion transpo...    28   6.1  
AY887909-1|AAX34421.1|  782|Caenorhabditis elegans anion transpo...    28   6.1  
U80029-7|ABC71799.1|  201|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U67954-8|AAB52608.2|  782|Caenorhabditis elegans Sulfate permease
           family protein 3 protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 596 PKFHWSPSF----AGGLQFAGASVHQRFLHARLRGIP 694
           PK+ WS SF    +GGL  A  SV Q    A + G+P
Sbjct: 52  PKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVP 88


>AY954524-1|AAX34432.2|  762|Caenorhabditis elegans anion
           transporter SULP-3b protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 596 PKFHWSPSF----AGGLQFAGASVHQRFLHARLRGIP 694
           PK+ WS SF    +GGL  A  SV Q    A + G+P
Sbjct: 52  PKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVP 88


>AY887909-1|AAX34421.1|  782|Caenorhabditis elegans anion
           transporter SULP-3a protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +2

Query: 596 PKFHWSPSF----AGGLQFAGASVHQRFLHARLRGIP 694
           PK+ WS SF    +GGL  A  SV Q    A + G+P
Sbjct: 52  PKYDWSHSFFGDLSGGLTMAVFSVPQGIALASITGVP 88


>U80029-7|ABC71799.1|  201|Caenorhabditis elegans Hypothetical
           protein T20D4.10 protein.
          Length = 201

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 6   CSKFTHKSCCNINEVKQFGGVQRASEFRMHDTIVRLADVWKTCN 137
           C ++  K  C + EVK+  G Q    FR H   +    V  TC+
Sbjct: 153 CKRYFGKDDCMMKEVKETCGQQEWDSFRKHFITIAGGFVDTTCD 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,477,441
Number of Sequences: 27780
Number of extensions: 333856
Number of successful extensions: 1020
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)