Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29f10
         (294 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0016 - 17176360-17176881                                         27   3.5  
01_04_0020 + 15142402-15143421                                         27   3.5  
04_04_0805 + 28184394-28185239                                         26   4.6  
11_02_0044 - 7695794-7695918,7696353-7696542,7696633-7696759,770...    25   8.0  
07_01_0974 + 8211602-8212051                                           25   8.0  
02_04_0268 + 21435231-21435240,21435330-21435558,21435778-214358...    25   8.0  
02_01_0462 + 3332464-3332470,3333606-3335806                           25   8.0  
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702...    25   8.0  

>05_04_0016 - 17176360-17176881
          Length = 173

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 249 WIGGRAKAQPGGNTSFLKVGG 187
           W GGR +A  GG    + VGG
Sbjct: 114 WEGGRVRAAAGGRRQLVAVGG 134


>01_04_0020 + 15142402-15143421
          Length = 339

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +2

Query: 113 QKKYLPLYAIGKDEWTT----SRPAS*VPPPTLRNDVFPPG*AFARP 241
           Q +Y+P+YA   DE  T    S P +  PPP+      PP   +  P
Sbjct: 204 QGQYVPMYAQDSDEKATEKSVSSPVTAYPPPSNAVVAHPPVVPYGAP 250


>04_04_0805 + 28184394-28185239
          Length = 281

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 131 LYAIGKDEWTTSRPAS*VPPP 193
           L+A  KDEW T   A  +PPP
Sbjct: 261 LFATIKDEWETWLAAGLIPPP 281


>11_02_0044 -
           7695794-7695918,7696353-7696542,7696633-7696759,
           7701596-7701824,7702973-7703005,7703191-7703281
          Length = 264

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 113 QKKYLPLYAIGKDEWTTSRPAS*VPP 190
           +K+ L LY +  + W  + PA  VPP
Sbjct: 42  EKENLCLYGLPNETWEVNLPAEEVPP 67


>07_01_0974 + 8211602-8212051
          Length = 149

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 229 GSARR-EHVISQGGWRHLR-SGS*SSPLI 149
           GSAR   H+   GGWRH R   S ++PL+
Sbjct: 116 GSARSTSHLPGGGGWRHARLLASAAAPLL 144


>02_04_0268 +
           21435231-21435240,21435330-21435558,21435778-21435898,
           21435992-21436264
          Length = 210

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 113 QKKYLPLYAIGKDEWTTSRPAS*VPP 190
           +K+ L LY +  + W  + PA  VPP
Sbjct: 4   EKENLCLYGLPNETWDVTLPAEEVPP 29


>02_01_0462 + 3332464-3332470,3333606-3335806
          Length = 735

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 82  ILLHISNKILTKKIPSFIRHW 144
           ++  +SN +LT  IPS I +W
Sbjct: 302 MIFDVSNNMLTGSIPSLISNW 322


>01_02_0020 -
           10269252-10269314,10269442-10269483,10269759-10270244,
           10270338-10270421,10270491-10270556,10270718-10270810,
           10270901-10271987,10273338-10273362,10273881-10273899
          Length = 654

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 225 QPGGNTSFLKVGGG 184
           QPGG  +F KVGGG
Sbjct: 68  QPGGIDAFAKVGGG 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,103,135
Number of Sequences: 37544
Number of extensions: 145568
Number of successful extensions: 252
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 328462236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)