Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29f07
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000050F91A Cluster: COG1112: Superfamily I DNA and R... 39 0.095
UniRef50_Q8AV88 Cluster: Disrupted in schizophrenia 1 protein; n... 38 0.29
UniRef50_Q00VG0 Cluster: Homology to unknown gene; n=1; Ostreoco... 37 0.38
UniRef50_Q4X2N9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.88
UniRef50_Q54M88 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q7XDG5 Cluster: NB-ARC domain containing protein, expre... 35 2.0
UniRef50_Q6IMC6 Cluster: S6 sporozoite-induced protein; n=6; Pla... 35 2.0
UniRef50_A0VAZ4 Cluster: Putative uncharacterized protein precur... 34 3.6
UniRef50_Q2QUC2 Cluster: Retrotransposon protein, putative, uncl... 34 3.6
UniRef50_A4RIL4 Cluster: Putative uncharacterized protein; n=2; ... 34 3.6
UniRef50_Q6MJS2 Cluster: Putative uncharacterized protein precur... 33 4.7
UniRef50_Q2ILS1 Cluster: Putative uncharacterized protein precur... 33 4.7
UniRef50_A7R112 Cluster: Chromosome chr4 scaffold_333, whole gen... 33 4.7
UniRef50_Q87NW3 Cluster: Sensor protein; n=10; Vibrionales|Rep: ... 33 6.2
UniRef50_Q2L0W7 Cluster: GntR-family transcriptional regulator; ... 33 6.2
UniRef50_Q9NDI9 Cluster: Merozoite surface protein 3g; n=1; Plas... 33 6.2
UniRef50_Q675V8 Cluster: Putative integrase; n=1; Oikopleura dio... 33 6.2
UniRef50_Q6FSR6 Cluster: Candida glabrata strain CBS138 chromoso... 33 6.2
UniRef50_UPI0000F212E8 Cluster: PREDICTED: similar to C2-HC type... 33 8.2
UniRef50_UPI0000D66813 Cluster: PREDICTED: similar to KIAA1858 p... 33 8.2
UniRef50_UPI0000E4ED42 Cluster: X-linked retinitis pigmentosa GT... 33 8.2
UniRef50_Q97IT1 Cluster: Predicted transcriptional regulator; n=... 33 8.2
UniRef50_Q381H6 Cluster: Ubiquitin carboxyl-terminal hydrolase, ... 33 8.2
UniRef50_Q5AWI8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
>UniRef50_UPI000050F91A Cluster: COG1112: Superfamily I DNA and RNA
helicases and helicase subunits; n=1; Brevibacterium
linens BL2|Rep: COG1112: Superfamily I DNA and RNA
helicases and helicase subunits - Brevibacterium linens
BL2
Length = 1724
Score = 39.1 bits (87), Expect = 0.095
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = +2
Query: 296 TTNSSVDDEAKIERELAEMYKDN---SDYQTDRSEADSSSTTVHKEEGNLIARSRASGFK 466
+T+S+ + A + D+ SD T +S A++ T E + AS
Sbjct: 410 STSSTAEKNANEQASAKAAESDSGTPSDLGTSKSTAENKGTAKKPESAAAQGKEAASATA 469
Query: 467 FQPNLNSREEIERFRTSVDDISCDKVT---QRLGLTEPPVADTSSG 595
P + RE++ + T+ + + D T ++ G T+PPVADT+SG
Sbjct: 470 HGPAASGREDVAKTGTAKSEPTVDADTAGAEKSG-TKPPVADTASG 514
>UniRef50_Q8AV88 Cluster: Disrupted in schizophrenia 1 protein; n=5;
Danio rerio|Rep: Disrupted in schizophrenia 1 protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 963
Score = 37.5 bits (83), Expect = 0.29
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 26 DEMRLIHF-LVLLTIHLAVAKNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDE 202
D LI + L L L A +NN K LT SL RE++E+ + ++ + L+EE E DE
Sbjct: 876 DRCELISYRLHYLEEQLQTAIDNNDKELTLSLEREVLELKSALQAMLSQLKEEDEDEEDE 935
Query: 203 D 205
+
Sbjct: 936 E 936
>UniRef50_Q00VG0 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 1536
Score = 37.1 bits (82), Expect = 0.38
Identities = 20/99 (20%), Positives = 46/99 (46%)
Frame = +2
Query: 302 NSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNL 481
+ DD K+ +++ E + N D D ++ + ++ + + +L ++ + G K N
Sbjct: 269 DEQADDIKKVSKDVKEQEETNEDQSDDINKVEKTTKSTQDDVDDLSSKQQDQGKKIAQNE 328
Query: 482 NSREEIERFRTSVDDISCDKVTQRLGLTEPPVADTSSGQ 598
S +++ + DD +VT + T+ + D S+ Q
Sbjct: 329 ASINQLDA-QVRADDSKIKEVTDDVEKTDNKIVDVSTKQ 366
>UniRef50_Q4X2N9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 328
Score = 35.9 bits (79), Expect = 0.88
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 290 AETTNSSVD-DEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNL 436
+E S VD DE+ I+RE +++ +D SD D S+ D + + ++E ++
Sbjct: 218 SERDESDVDRDESDIDREESDIDRDESDIDRDESDVDRDESDIDRDESDI 267
>UniRef50_Q54M88 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 331
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +2
Query: 302 NSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNL 481
N DDE + E E + DN + T+ S+ DS KEE N ++ ++ ++ NL
Sbjct: 139 NEKEDDEEEQEEEDGDDDDDNENSSTENSDEDSDEDNQSKEEDNDNVKNNSTYNEYINNL 198
Query: 482 NSREE 496
N+ ++
Sbjct: 199 NNMKD 203
>UniRef50_Q7XDG5 Cluster: NB-ARC domain containing protein, expressed;
n=5; Oryza sativa|Rep: NB-ARC domain containing protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1814
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +2
Query: 383 RSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNSREEIERFRTSVDDISCDKVTQRLGL 562
RS+ +SS G++I + + +K N+N R+ IER S + +S V + +
Sbjct: 1217 RSKEHASSKQKVDTSGSVIEKVKEGRYK-SANINDRKHIERVHDSANKMSTTSVEKSIPE 1275
Query: 563 TEPPVADTSSGQKMAD 610
T P+ T + K D
Sbjct: 1276 TVKPMKATKNNSKATD 1291
>UniRef50_Q6IMC6 Cluster: S6 sporozoite-induced protein; n=6;
Plasmodium (Vinckeia)|Rep: S6 sporozoite-induced protein
- Plasmodium yoelii
Length = 2720
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +2
Query: 317 DEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNSREE 496
DEA I+++ A++ K+ +D Q + ++ T + KEE +I + A K + ++ +
Sbjct: 2345 DEADIKKDEADIKKEETDIQKEEADIKKEETDIQKEEEAVIKKDEAD-IKKETDIKKETD 2403
Query: 497 IER 505
I++
Sbjct: 2404 IKK 2406
>UniRef50_A0VAZ4 Cluster: Putative uncharacterized protein
precursor; n=1; Delftia acidovorans SPH-1|Rep: Putative
uncharacterized protein precursor - Delftia acidovorans
SPH-1
Length = 401
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 230 LDAEWRWFRLRHSQP-TAPLRGPEVVLLL 147
LDAE RW R RH+ P T P+ PE + LL
Sbjct: 130 LDAEGRWLRPRHAAPATQPVPDPEAIRLL 158
>UniRef50_Q2QUC2 Cluster: Retrotransposon protein, putative,
unclassified; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 1913
Score = 33.9 bits (74), Expect = 3.6
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 326 KIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNSREEIE 502
K ++LA + N+DY R +D + +++EE + RSR S K + + E+IE
Sbjct: 906 KARKDLATLVSHNADYSEIRRSSDVLNELLYREEMLWLQRSRISWLKEVKSTHEMEKIE 964
>UniRef50_A4RIL4 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 188
Score = 33.9 bits (74), Expect = 3.6
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +2
Query: 320 EAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNSREEI 499
E+++E ++ + ++ + Q + SE + + K++ L +RS A + L+ + +
Sbjct: 56 ESEVEDDILRVQQEIARLQRESSEKFNRLLRLRKQKRLLQSRSEAEAVRLDAELSVEDAV 115
Query: 500 ERFRTSVDDISCD 538
ER R VD++ D
Sbjct: 116 ERDRLGVDELPFD 128
>UniRef50_Q6MJS2 Cluster: Putative uncharacterized protein
precursor; n=1; Bdellovibrio bacteriovorus|Rep: Putative
uncharacterized protein precursor - Bdellovibrio
bacteriovorus
Length = 407
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/72 (25%), Positives = 40/72 (55%)
Frame = +2
Query: 308 SVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNS 487
S++++AK +E A+ ++++ + + +E D + T KE+ + AR +A+ K Q +
Sbjct: 86 SLENDAK--KEQADSERESAKLKAETNEHDRAKTAAEKEQASAQARIKAAQEKTQKAIQI 143
Query: 488 REEIERFRTSVD 523
R+E + R +
Sbjct: 144 RDEAQAKRKQAE 155
>UniRef50_Q2ILS1 Cluster: Putative uncharacterized protein
precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Putative uncharacterized protein precursor -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 396
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -2
Query: 514 GPEPFDFLSTVQIWLKLEARRSAPGDQITLLLVYSRGATIRFRAICLVIRI 362
G EP + +++ L EAR + PGD++ LL+ RGA R R L + +
Sbjct: 31 GAEPAAAATALELELSFEAREALPGDEV-LLVARLRGADGRGRDAALTVEV 80
>UniRef50_A7R112 Cluster: Chromosome chr4 scaffold_333, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_333, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 714
Score = 33.5 bits (73), Expect = 4.7
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 287 RAETTNSSVDDEAKIERELAE-MYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGF 463
RA+T +D+ E + E + D + +TD +E D S HK + +A +
Sbjct: 347 RAKTLKRKYNDDEVAELAMKEFLASDTDESETDDNENDDQSDKEHKRQNKYLALLESGDG 406
Query: 464 KFQPNLNSREEIE-RFRTSVDDIS 532
+ + +++E F T ++DIS
Sbjct: 407 SDRDDEEDGQDMEVTFNTGLEDIS 430
>UniRef50_Q87NW3 Cluster: Sensor protein; n=10; Vibrionales|Rep:
Sensor protein - Vibrio parahaemolyticus
Length = 1051
Score = 33.1 bits (72), Expect = 6.2
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 MRLIHFLVL-LTIHLAVAKNNNVKTLTESLGREIIEIDNPIKELPPGLEE 178
M L+ LV+ LTI L NN+ + E L RE D+P+ EL G +E
Sbjct: 303 MSLVTILVISLTIRLVRKVTNNLHLVLEFLSRENYSEDSPLSELIKGKDE 352
>UniRef50_Q2L0W7 Cluster: GntR-family transcriptional regulator;
n=1; Bordetella avium 197N|Rep: GntR-family
transcriptional regulator - Bordetella avium (strain
197N)
Length = 288
Score = 33.1 bits (72), Expect = 6.2
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 311 VDDEAKIERELAEMYKDNSDYQT-DRSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNS 487
+DD A+ REL E + ++ +Q A S T + L+ + + G++F P+L+S
Sbjct: 99 IDDRAR--RELPETFTESELHQRYGAPRAILSKTLLQLSADGLLEKRKGHGWRFAPSLDS 156
Query: 488 RE---EIERFRTSVD 523
E E RFR +V+
Sbjct: 157 AEAVAESYRFRMTVE 171
>UniRef50_Q9NDI9 Cluster: Merozoite surface protein 3g; n=1;
Plasmodium vivax|Rep: Merozoite surface protein 3g -
Plasmodium vivax
Length = 969
Score = 33.1 bits (72), Expect = 6.2
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 53 VLLTIHLAVAKNNNVKTLTESLGREIIEIDNPIKELPPGLEEEPSAENDED 205
VL + ++ + NNN+ + E + E+ E +N + PP EE + E DE+
Sbjct: 828 VLEQVDVSPSGNNNLNDVDEQVSLEVGEQENESDDAPPQETEEVTEEGDEE 878
>UniRef50_Q675V8 Cluster: Putative integrase; n=1; Oikopleura
dioica|Rep: Putative integrase - Oikopleura dioica
(Tunicate)
Length = 908
Score = 33.1 bits (72), Expect = 6.2
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 368 DYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQPNLNSREEIERFRTSVDDIS----- 532
+Y T SE+ V + + I + SG F+ +L + +EI + ++IS
Sbjct: 212 EYPTVYSESGMKGRVVTDSDFSQIFNIKESGKTFEASLKNEDEIVLSKCKTNEISRKKKA 271
Query: 533 -CDKVTQRLGLTEPPVADTSSGQK 601
CD T +EPP +SS +K
Sbjct: 272 PCDSFTDDSSSSEPPPKKSSSRRK 295
>UniRef50_Q6FSR6 Cluster: Candida glabrata strain CBS138 chromosome
G complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome G complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 451
Score = 33.1 bits (72), Expect = 6.2
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +2
Query: 104 LTESLGREIIEIDNPIKELPPGLE-----EEPSAENDEDGTSATLRPXXXXXXXXXXXXX 268
L LG + ++D I+ LE ++P EN+ED + A +
Sbjct: 176 LVRKLGFTLQDLDERIRNGSKALETDDKIDKPIDENNEDDSKAESKEDAKKKISFSKYLK 235
Query: 269 XXXXXXRAETTNSSVDDEAKIERELAEMYKDNSDYQTDRSE-ADSSSTTVHKEEGNLIAR 445
+ ETT S +DE E E + K + D D +E ++ + K+ N ++
Sbjct: 236 ------KDETTKRSRNDELNEESEQNKKLKVDDDNGYDNNENINNGLRPILKKRENNKSK 289
Query: 446 SRASGFKFQ 472
S++SG KFQ
Sbjct: 290 SKSSGIKFQ 298
>UniRef50_UPI0000F212E8 Cluster: PREDICTED: similar to C2-HC type
zinc finger protein X-MyT1; n=2; Danio rerio|Rep:
PREDICTED: similar to C2-HC type zinc finger protein
X-MyT1 - Danio rerio
Length = 1188
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +2
Query: 293 ETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQ 472
E DD + E E+ E D+ D + RSE S T GNL +A K +
Sbjct: 392 EEEEEEEDDGEEEEEEIDEADDDDLDSMSQRSEVTDDSETYDMTRGNLGLLEQAIALKAE 451
Query: 473 PNLNSREE 496
+S EE
Sbjct: 452 QTGHSSEE 459
>UniRef50_UPI0000D66813 Cluster: PREDICTED: similar to KIAA1858
protein; n=1; Mus musculus|Rep: PREDICTED: similar to
KIAA1858 protein - Mus musculus
Length = 3633
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +2
Query: 296 TTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQP 475
T++ ++D+AK++R + E + +YQ+D E DSS V +E +R ++G
Sbjct: 775 TSDLDMEDDAKLDRLITEAL-NGMEYQSDNPEIDSSFIDVFADEEPSGSRGPSTGHPLNN 833
Query: 476 NLNS 487
+ S
Sbjct: 834 QVGS 837
>UniRef50_UPI0000E4ED42 Cluster: X-linked retinitis pigmentosa GTPase
regulator.; n=6; Euteleostomi|Rep: X-linked retinitis
pigmentosa GTPase regulator. - Danio rerio
Length = 1064
Score = 32.7 bits (71), Expect = 8.2
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +2
Query: 290 AETTNSSVDDEAKIE----RELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRAS 457
A T + S DDE K E E E + NS+ +++RSE D KEE + S A
Sbjct: 825 ASTEDESNDDEDKSETSQEEESGEESEGNSESRSERSEEDDEDEESEKEESEV--ESEAE 882
Query: 458 GFKFQPNLNSREEIERFRTSVDD 526
+ N + ++ E+ +S D+
Sbjct: 883 EDETGENTSEEDDEEQESSSEDE 905
>UniRef50_Q97IT1 Cluster: Predicted transcriptional regulator; n=1;
Clostridium acetobutylicum|Rep: Predicted
transcriptional regulator - Clostridium acetobutylicum
Length = 118
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 293 ETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSR 451
ET + VD E I L E+Y ++DY + +S++ T+ EE NLI + R
Sbjct: 39 ETGRTRVDLETLIR--LCEIYNVDADYILSTDKKNSNNLTLKPEESNLIVKFR 89
>UniRef50_Q381H6 Cluster: Ubiquitin carboxyl-terminal hydrolase,
putative; n=1; Trypanosoma brucei|Rep: Ubiquitin
carboxyl-terminal hydrolase, putative - Trypanosoma
brucei
Length = 1184
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 245 FPPSFLDAEWRWFRLRHSQPTAPLRGPEVVLLLGCRFQLSPVPGSP 108
FP ++D RW R P PLR P L + SPVP +P
Sbjct: 281 FPVEWMDELLRWLTDRDEVPLLPLRCPSQSLTPVSQMDYSPVPCAP 326
>UniRef50_Q5AWI8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1912
Score = 32.7 bits (71), Expect = 8.2
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +2
Query: 413 VHKEEGNLIARSRASGFKFQPNLNSREEIERFRTSVDDISCDKVTQRLGLTEPPVADTSS 592
+H + + A + G Q LN R EIE+ R S+ ++ V + L P SS
Sbjct: 1054 LHNKPALVQALEKRKGATIQRRLNRRLEIEQMRESMQEVRPSGVIRLLSRPRPDWYIPSS 1113
Query: 593 GQKMADLIS 619
G MA L +
Sbjct: 1114 GPGMAPLFT 1122
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,752,636
Number of Sequences: 1657284
Number of extensions: 13731321
Number of successful extensions: 43151
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 41179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43107
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -