Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29f07
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    26   1.2  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   2.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   5.0  
Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    23   8.7  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.7  

>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/56 (23%), Positives = 29/56 (51%)
 Frame = +2

Query: 401 SSTTVHKEEGNLIARSRASGFKFQPNLNSREEIERFRTSVDDISCDKVTQRLGLTE 568
           S   +H    N+I +S+   F F+P+L++  ++ R   ++    C++ +  L L +
Sbjct: 21  SRMALHTFNNNIIPKSQ---FGFRPSLSTTHQLHRVTNNIVHNRCNRKSTGLALLD 73


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 176 LRGPEVVLLLGCRFQLSPVPGS 111
           LRGPE V     R +  PVPG+
Sbjct: 308 LRGPEAVREAAGRLRTGPVPGA 329


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 119 GREIIEIDNPIKELPPGLEEEPSAENDEDGTSA 217
           G EII   + +  L PG+  E +++  E+  SA
Sbjct: 672 GAEIIAFADDLLLLDPGITPEAASQRAEEAVSA 704


>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 663 GIYLSNNRYIMKICFEIRSAIFC 595
           GIY   NR+I  I F  R A  C
Sbjct: 227 GIYARVNRFISWINFNTRDACTC 249


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 13/71 (18%), Positives = 27/71 (38%)
 Frame = +2

Query: 293 ETTNSSVDDEAKIERELAEMYKDNSDYQTDRSEADSSSTTVHKEEGNLIARSRASGFKFQ 472
           +  +  +D+  +  +    + K + D  +DR   D     +     N   RSR+S     
Sbjct: 227 QKAHQRIDEGKRTIKTYEALVKSSLDPNSDRLTEDDEDENISVTRTNSTIRSRSSSLSRS 286

Query: 473 PNLNSREEIER 505
            + + + E  R
Sbjct: 287 RSCSRQAETPR 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,628
Number of Sequences: 2352
Number of extensions: 13507
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)