Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29e23
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.36
U41037-2|AAA82388.3| 651|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.5
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 30 1.5
Z81113-7|CAI79236.1| 351|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z68213-5|CAA92434.1| 512|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF022979-5|ABD94089.1| 160|Caenorhabditis elegans Hypothetical ... 29 2.5
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 29 2.5
Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical pr... 29 4.4
U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical pr... 28 5.9
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 28 5.9
U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 5.9
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 5.9
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 7.8
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 28 7.8
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 28 7.8
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 28 7.8
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 28 7.8
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 28 7.8
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.36
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +2
Query: 206 TLYDRITKNLNKSSPQPTFATSKLPKIVKPPASYA--SDKNIRTKEKVDAGDNFAGTSKR 379
T+ R +KN N + Q ++ P + KPP SD+ K + NF S
Sbjct: 577 TILRRPSKNANDTMNQSQTQGAETPLVAKPPLHPPGNSDQQYSMMNKRKSSKNF-DDSLN 635
Query: 380 MGSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINTEDIPSFEQ 511
+G N K + +P + T+ RNS NT D F Q
Sbjct: 636 LG------NMKFDHELGMVLPEGFELPTSSRNSRNTADNLQFSQ 673
>U41037-2|AAA82388.3| 651|Caenorhabditis elegans Hypothetical
protein T24C12.3 protein.
Length = 651
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 233 LNKSSPQPTFATSKLPKIVKPPASYASDKNIRTKEKVDAGDNFAG-TSKRMGSQKSN 400
L S QPT +T++ PK+V A+ + I +++ D G ++ G +RMG N
Sbjct: 318 LTISQSQPTASTTRKPKVVSIGATIVDFEAITSEDVKDDGGSYNGQVVQRMGGVARN 374
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +2
Query: 182 RFPRQKPNTLYDRITKNLNKSSPQPTFATSKLP--------KIVKPPASYASDKNIRTKE 337
R PR++ R + K S +P+ + SK P K+ + P+ S R +
Sbjct: 175 RSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSREDPRKVARKPSRSRSRSAERLRR 234
Query: 338 KVDAGDNFAGTSKRMGSQKSNKNYKLEKSKP--SHIPRRLQEATAKRNS 478
K + ++M +S K S+ SHIPR LQ+ ++ +S
Sbjct: 235 KSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDS 283
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +2
Query: 182 RFPRQKPNTLYDRITKNLNKSSPQPTFATSKLP--------KIVKPPASYASDKNIRTKE 337
R PR++ R + K S +P+ + SK P K+ + P+ S R +
Sbjct: 175 RSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSREDPRKVARKPSRSRSRSAERLRR 234
Query: 338 KVDAGDNFAGTSKRMGSQKSNKNYKLEKSKP--SHIPRRLQEATAKRNS 478
K + ++M +S K S+ SHIPR LQ+ ++ +S
Sbjct: 235 KSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDS 283
>Z81113-7|CAI79236.1| 351|Caenorhabditis elegans Hypothetical
protein T03F6.7 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 368 TSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINTEDIPSFEQTEEKT 526
T K S S NY L K P+HI LQ + + N E + +F+++ +K+
Sbjct: 39 TEKAKLSMTSKSNYDLVKKVPTHI-HCLQFSPIRHNGKCAEILVNFDESNQKS 90
>Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical
protein F11F1.8 protein.
Length = 176
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/77 (25%), Positives = 39/77 (50%)
Frame = +2
Query: 146 VLDRLKTSKNDQRFPRQKPNTLYDRITKNLNKSSPQPTFATSKLPKIVKPPASYASDKNI 325
++ +L S ND+ + +T++ I + LN+ + LP ++ + DKN+
Sbjct: 77 IIGQLLGSANDEL--KNLISTVFKLIEQLLNEVAD----ILQSLPDVLGDLSKIVDDKNL 130
Query: 326 RTKEKVDAGDNFAGTSK 376
+ EK+DA + GT+K
Sbjct: 131 TSVEKIDAINQLRGTNK 147
>Z68213-5|CAA92434.1| 512|Caenorhabditis elegans Hypothetical
protein C01F6.1 protein.
Length = 512
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 305 YASDKNIRTKEKVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAK--RNS 478
++ DK++ EKV + G S ++K N NY++EK + + + ++ K S
Sbjct: 29 FSLDKDMEVVEKVAETEAIYGQSDAFFTEKLNLNYRIEKMQRYRVTINVLNSSTKTIMGS 88
Query: 479 INTED 493
+ T D
Sbjct: 89 MGTAD 93
>AF022979-5|ABD94089.1| 160|Caenorhabditis elegans Hypothetical
protein T02B11.9 protein.
Length = 160
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 293 PPASYASDKNIRTKEKVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKR 472
P S S + K K +G N A +R+ +Q N K+EK KP + +A K
Sbjct: 74 PVVSRLSCVRMAPKLKTHSGVNTAEVYERL-NQNDNSRQKMEKEKPPSAEIKTPKAAPKT 132
Query: 473 NSINTED 493
N D
Sbjct: 133 KLSNESD 139
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 29.5 bits (63), Expect = 2.5
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +2
Query: 155 RLKTSKNDQRF-PRQKPNTLYDRITKNLNKSSPQPTFATSKLPKIVKPPASYASDKNIRT 331
R K SK D++ +++ N+ + K+ N ++P P A S +P A S ++ R
Sbjct: 52 RSKRSKRDKKQNSKRQQNSKRQKKIKS-NSAAPAPP-AKSGVPAKSAEKAKEGSQRSARL 109
Query: 332 KEKVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINTEDIPSFEQ 511
K+ + + K+ GSQ+S ++ K KP + ++ +E + + + P E+
Sbjct: 110 KK-----EQKSEKKKKEGSQRSARSKKASSEKP-EVEKKPEEPPVEDEAKTPPEKPKVEE 163
>Z70205-3|CAD44095.1| 191|Caenorhabditis elegans Hypothetical
protein C11H1.8 protein.
Length = 191
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 263 ATSKLPKIVKPPASYASDKNIRTKEKVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIP 442
A +LPK A + +T V+ +N + K S +++N SKPS
Sbjct: 52 ANGELPKTSSTAAPSLVRSSRQTDSYVNGTNN--NSKKLSASVATSRNGSRRLSKPSTSS 109
Query: 443 RRLQEATAKRNSINTEDIPSFE-QTEE--KTLAEIKNIQRVQLLINT 574
R +++ + T+ +P FE T + K LA +Q ++ +++
Sbjct: 110 TRATQSSMTNGTTATQTVPHFEVPTAQVAKLLAAPSTVQVAEITLSS 156
>U80031-6|AAB37618.2| 491|Caenorhabditis elegans Hypothetical
protein B0554.7 protein.
Length = 491
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 660 LIFVSFICFSRFVFLFKFLRSLRHAFVMAVL 568
L+ +S CF+ F F F F+ S H F VL
Sbjct: 84 LLVISSFCFAAFPFGFLFINSYYHYFSTVVL 114
>Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical
protein C43F9.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/80 (23%), Positives = 41/80 (51%)
Frame = +2
Query: 314 DKNIRTKEKVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINTED 493
D + + K +D ++ R+GS + +K+ K EKS ++ + +TA N+ +
Sbjct: 9 DDSQQRKSFLDKQNSSKTAKSRVGSSEKSKSSKTEKS-TQQSEKKTERSTA--NTTIKSE 65
Query: 494 IPSFEQTEEKTLAEIKNIQR 553
PS + +++ A I+++ R
Sbjct: 66 APSKKLITQQSTASIQSVGR 85
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Frame = +2
Query: 176 DQRFPRQKPNTLYDRITKNLNKSSPQPTFA-----TSKLPKIVKPPASYASDKNIRTKEK 340
DQ R+ ++ DR K+L + S Q TS K +P S D+N EK
Sbjct: 118 DQEQSRKIDRSIKDRNPKSLEQKSHQKNVGEGSKRTSSSRKPEEPERSRRDDRNRLRSEK 177
Query: 341 VDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHI 439
G + + + K + + + E+ KP I
Sbjct: 178 TAQGSSKSLRKQVSNRSKRSSSDREEREKPKMI 210
>U40954-8|AAM69083.2| 471|Caenorhabditis elegans Hypothetical
protein ZK813.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 293 PPASYASDKNIRTKE----KVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEA 460
PP+S + N+ V A N + ++ K S PS IPR++ +
Sbjct: 392 PPSSVTQETNLPITSIPPVSVPASANCTPSPSETPKPRAQDAGKARSSVPSKIPRQIPQF 451
Query: 461 TAKRNSINTE 490
KRN+ T+
Sbjct: 452 KTKRNNSKTK 461
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/108 (22%), Positives = 50/108 (46%)
Frame = +1
Query: 325 KNKRKSRCRRQFCWDQ*ANGLTEIQQKLQTRKIKTKSYTATTTRSDG*KEFNKHRRHS*F 504
K K KS+ +R + + E +QK + + KTK T+ S+ +E + R+
Sbjct: 113 KKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTS----SESSEESEEERKVKKS 168
Query: 505 *ANRRENTR*NKKHSKGSTFDQYSHDESMPQTPKEFEKENETRKTNER 648
N+ ++ + + S+ S D+ +S K+ + E+E+ +E+
Sbjct: 169 KKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEK 216
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/108 (22%), Positives = 50/108 (46%)
Frame = +1
Query: 325 KNKRKSRCRRQFCWDQ*ANGLTEIQQKLQTRKIKTKSYTATTTRSDG*KEFNKHRRHS*F 504
K K KS+ +R + + E +QK + + KTK T+ S+ +E + R+
Sbjct: 113 KKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTS----SESSEESEEERKVKKS 168
Query: 505 *ANRRENTR*NKKHSKGSTFDQYSHDESMPQTPKEFEKENETRKTNER 648
N+ ++ + + S+ S D+ +S K+ + E+E+ +E+
Sbjct: 169 KKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEK 216
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 350 GDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKR--NSINTEDI--PSFEQTE 517
GDN +SK +QKSNK+ + P IP T K + + T ++ P+ TE
Sbjct: 18 GDNQQKSSKE--NQKSNKDKQSSNQPPGQIPHSTNSGTRKSSGSGLKTANLKHPARPSTE 75
Query: 518 EKT 526
T
Sbjct: 76 SST 78
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 547 SKGSTFDQYSHDESMPQTPKEFEKENETRKTNERNK 654
S S+ D S ES P+ PK+ +K+N + ++ K
Sbjct: 718 SSDSSSDSSSSSESEPEPPKKKKKKNSEESSKKKEK 753
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 350 GDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKR--NSINTEDI--PSFEQTE 517
GDN +SK +QKSNK+ + P IP T K + + T ++ P+ TE
Sbjct: 18 GDNQQKSSKE--NQKSNKDKQSSNQPPGQIPHSTNSGTRKSSGSGLKTANLKHPARPSTE 75
Query: 518 EKT 526
T
Sbjct: 76 SST 78
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 383 GSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINT--EDI------PSFEQTEEKTLAE 535
GS S + +++KP +PRR+ +R+S+N+ ED SFE+ EE+ E
Sbjct: 131 GSSTSESSPCEDEAKPMPLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNE 189
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 383 GSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINT--EDI------PSFEQTEEKTLAE 535
GS S + +++KP +PRR+ +R+S+N+ ED SFE+ EE+ E
Sbjct: 27 GSSTSESSPCEDEAKPMPLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNE 85
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 7.8
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Frame = +2
Query: 140 AEVLDRLKTSKNDQRFPRQKPNTLYDRITKNLNKSSPQPTFATSKLPKIVKPPASYASDK 319
AE +D N + KP++ ++ ++++ ++P+ + + ++ PAS AS K
Sbjct: 190 AEKVDFTTDDNNVSQEADAKPDSTHENGGEHVS-TTPEESITENTTAEV---PASTASTK 245
Query: 320 NIRTKEKVDAGDNFAGTSKRMGSQKSNKNYKLE---KSKPSHIPRRLQEATAKRNSINTE 490
+ + K+ + D K +K N KLE K + + R L E +
Sbjct: 246 DTKLSVKIRSEDEKREEDKLSDDEKPNYMKKLEEIYKKEEELVERELAEMSVAEIFEKEV 305
Query: 491 DIPSFEQTEEKTLAEI 538
I + + T T EI
Sbjct: 306 VIKTTKVTPTSTTTEI 321
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
1 protein.
Length = 1073
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +2
Query: 284 IVKPPASYASDKNIRTKEKVDAGDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEAT 463
I P Y I + ++ D G+ + G+ + +L K+ P +P LQ+ +
Sbjct: 686 ITGKPDEYEQLLQIESVQESDYGEYVCRATN--GNGGDHVVIELRKTSPPALPLDLQKLS 743
Query: 464 AKRNSINTEDIPSFEQTEEKT 526
A NS+ +P F+ ++T
Sbjct: 744 ATSNSVLLGWVPQFDGGADQT 764
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 350 GDNFAGTSKRMGSQKSNKNYKLEKSKPSHIPRRLQEATAKR--NSINTEDI--PSFEQTE 517
GDN +SK +QKSNK+ + P IP T K + + T ++ P+ TE
Sbjct: 18 GDNQQKSSKE--NQKSNKDKQSSNQPPGQIPHSTNSGTRKSSGSGLKTANLKHPARPSTE 75
Query: 518 EKT 526
T
Sbjct: 76 SST 78
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 547 SKGSTFDQYSHDESMPQTPKEFEKENETRKTNERNK 654
S S+ D S ES P+ PK+ +K+N + ++ K
Sbjct: 718 SSDSSSDSSSSSESEPEPPKKKKKKNSEESSKKKEK 753
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 383 GSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINT--EDI------PSFEQTEEKTLAE 535
GS S + +++KP +PRR+ +R+S+N+ ED SFE+ EE+ E
Sbjct: 77 GSSTSESSPCEDEAKPMPLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNE 135
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 383 GSQKSNKNYKLEKSKPSHIPRRLQEATAKRNSINT--EDI------PSFEQTEEKTLAE 535
GS S + +++KP +PRR+ +R+S+N+ ED SFE+ EE+ E
Sbjct: 131 GSSTSESSPCEDEAKPMPLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNE 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,458,191
Number of Sequences: 27780
Number of extensions: 284133
Number of successful extensions: 1131
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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