Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29e21
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF043693-11|AAB97541.2| 213|Caenorhabditis elegans Hypothetical... 30 1.8
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p... 29 3.1
Z78419-1|CAB01705.1| 306|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 28 5.4
U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like prot... 28 7.2
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 27 9.5
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 27 9.5
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 535 CPTKCMLVMLIPAPDSLTRASPICFPICIA 446
C T+ V PAP + P C P+CIA
Sbjct: 663 CATQTPAVQAAPAPSCQPQCQPACEPVCIA 692
>AF043693-11|AAB97541.2| 213|Caenorhabditis elegans Hypothetical
protein C34B2.9 protein.
Length = 213
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 423 SSKAIPIVRSE-PPLPSPTIRHFSS*WLSKPTIPPW*LVL*PYPEIQRC 280
+S PI+ S PP SP H SS + P +PP L +I RC
Sbjct: 104 ASSRRPIISSNNPPSSSPVPLHVSSSTIPPPPLPPLPTTLHSNSQISRC 152
>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 226 LCHRPSYLVLTLTYPRSPTPLDFGVG 303
L H P Y VL L+Y R P+DFG G
Sbjct: 808 LLHDPEYWVL-LSYTRETEPVDFGSG 832
>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
protein C38D9.5 protein.
Length = 1213
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 226 LCHRPSYLVLTLTYPRSPTPLDFGVG 303
L H P Y VL L+Y R P+DFG G
Sbjct: 808 LLHDPEYWVL-LSYTRETEPVDFGSG 832
>Z78419-1|CAB01705.1| 306|Caenorhabditis elegans Hypothetical
protein F26A3.1 protein.
Length = 306
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 519 IHLVGHSLGAHMMGYAGKQAREKGYTVARITGLDP 623
++++GHS+G++MM + ++G+ V + GL P
Sbjct: 115 LYILGHSIGSYMMLRIIPEVIKEGFHVEKAVGLFP 149
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 162 AAWLRCYKGSLDDFIVAPLTESLSPSFISCIDPDL 266
A W C +GSL D I+ S+ P F+ C+ D+
Sbjct: 597 AVWKLCMRGSLQD-IIGQGNFSIDPFFMFCVIRDM 630
>U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical
protein T21D11.1 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 417 LSYALYAVPKAIQIGKQMGDALVRLSGAGINMTSIHLVGHSLG-AHMMGY-AGKQAREKG 590
+++A Y + + +L + G + T++H +GH LG H M A A ++
Sbjct: 127 VAHAFYPRDGRLHFDAEEQWSLNSVEGVNLFQTAVHEIGHLLGLEHSMDVRAAMFAAKRP 186
Query: 591 YTVARITGLDPARAL 635
Y A G D RA+
Sbjct: 187 YDPAFTLGDDDVRAI 201
>AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like protein
protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 417 LSYALYAVPKAIQIGKQMGDALVRLSGAGINMTSIHLVGHSLG-AHMMGY-AGKQAREKG 590
+++A Y + + +L + G + T++H +GH LG H M A A ++
Sbjct: 127 VAHAFYPRDGRLHFDAEEQWSLNSVEGVNLFQTAVHEIGHLLGLEHSMDVRAAMFAAKRP 186
Query: 591 YTVARITGLDPARAL 635
Y A G D RA+
Sbjct: 187 YDPAFTLGDDDVRAI 201
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 268 GKSGSIQDMKDGDRDSVSGATMKSSKDPL*HLSHAASINLVKFKTTKK 125
G +G MK RDS ++ + DPL H +S+N K K KK
Sbjct: 281 GAAGGGGQMKRARRDSDGASSDSDNSDPL-EKMHFSSMNQKKTKAQKK 327
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 268 GKSGSIQDMKDGDRDSVSGATMKSSKDPL*HLSHAASINLVKFKTTKK 125
G +G MK RDS ++ + DPL H +S+N K K KK
Sbjct: 286 GAAGGGGQMKRARRDSDGASSDSDNSDPL-EKMHFSSMNQKKTKAQKK 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,711,996
Number of Sequences: 27780
Number of extensions: 301395
Number of successful extensions: 757
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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