Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29e21
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   4.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   8.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 387 EAQSGLLGLPLSYALYAVPKAIQIGKQMGDALVRLSGAGINMTSIH 524
           + QSG LG   +  +Y +P++    K    A+ R   A ++ T  H
Sbjct: 602 DIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTHSH 647


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 485 EAVWCWDQHDEH 520
           ++VWCWD   E+
Sbjct: 455 DSVWCWDTRKEY 466


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 240 FISCIDPDLPTIA 278
           +I+C+DP+LP +A
Sbjct: 592 WINCLDPNLPKLA 604


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +3

Query: 264 LPTIAYTFGFRGRVKGPATTAVLSAYLATKKRNVLLLDWEEEAQS 398
           L  +      RG V+G     ++ + +  K   ++LL+++EE +S
Sbjct: 292 LAVVTLNLHHRG-VRGTRVPGIVRSLVLDKLARIVLLNFQEERRS 335


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 281 VGDRG*VRVNTRYEGR 234
           +G+   VRV TRY GR
Sbjct: 357 MGNHDRVRVGTRYPGR 372


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,758
Number of Sequences: 438
Number of extensions: 3886
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)