Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29e19
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008430-1|AAH08430.1|  205|Homo sapiens family with sequence si...   117   4e-26
AF223467-1|AAF64142.1|  205|Homo sapiens NPD008 protein protein.      117   4e-26
AF151906-1|AAD34143.1|  181|Homo sapiens CGI-148 protein protein.     117   4e-26
BC011952-1|AAH11952.1|  276|Homo sapiens family with sequence si...    84   4e-16
AB074181-1|BAE45741.1|  164|Homo sapiens putative protein produc...    83   1e-15
BC067364-1|AAH67364.1|  871|Homo sapiens PRP40 pre-mRNA processi...    31   2.8  
BC050398-1|AAH50398.1|  788|Homo sapiens PRPF40B protein protein.      31   2.8  

>BC008430-1|AAH08430.1|  205|Homo sapiens family with sequence
           similarity 18, member B protein.
          Length = 205

 Score =  117 bits (281), Expect = 4e-26
 Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
 Frame = +2

Query: 413 RLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMGLTLCPLVWSTFFIF 574
           RL+VGLRWWN++D++GKSHWVFE+R+     N      ESR+FW+GL  CP++W  F   
Sbjct: 85  RLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFAFS 144

Query: 575 CLFGLKFKWMLLVLIALTLTGANLYGYIKCK 667
            LF  + KW+ +V++ + L GANLYGYI+CK
Sbjct: 145 ALFSFRVKWLAVVIMGVVLQGANLYGYIRCK 175


>AF223467-1|AAF64142.1|  205|Homo sapiens NPD008 protein protein.
          Length = 205

 Score =  117 bits (281), Expect = 4e-26
 Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
 Frame = +2

Query: 413 RLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMGLTLCPLVWSTFFIF 574
           RL+VGLRWWN++D++GKSHWVFE+R+     N      ESR+FW+GL  CP++W  F   
Sbjct: 85  RLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFAFS 144

Query: 575 CLFGLKFKWMLLVLIALTLTGANLYGYIKCK 667
            LF  + KW+ +V++ + L GANLYGYI+CK
Sbjct: 145 ALFSFRVKWLAVVIMGVVLQGANLYGYIRCK 175


>AF151906-1|AAD34143.1|  181|Homo sapiens CGI-148 protein protein.
          Length = 181

 Score =  117 bits (281), Expect = 4e-26
 Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 6/91 (6%)
 Frame = +2

Query: 413 RLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMGLTLCPLVWSTFFIF 574
           RL+VGLRWWN++D++GKSHWVFE+R+     N      ESR+FW+GL  CP++W  F   
Sbjct: 85  RLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACPVLWVIFAFS 144

Query: 575 CLFGLKFKWMLLVLIALTLTGANLYGYIKCK 667
            LF  + KW+ +V++ + L GANLYGYI+CK
Sbjct: 145 ALFSFRVKWLAVVIMGVVLQGANLYGYIRCK 175


>BC011952-1|AAH11952.1|  276|Homo sapiens family with sequence
           similarity 18, member B2 protein.
          Length = 276

 Score = 84.2 bits (199), Expect = 4e-16
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
 Frame = +2

Query: 413 RLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMGLTLCPLVWSTFFIF 574
           RL+VGLRWWN++D++GKSHWVFE+R+     N      ESR+FW+GL  C ++W  F   
Sbjct: 85  RLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLGLIACSVLWVIFAFS 144

Query: 575 CLFGLKFKWM 604
            LF    KW+
Sbjct: 145 ALFSFTVKWL 154


>AB074181-1|BAE45741.1|  164|Homo sapiens putative protein product
           of Nbla10383 protein.
          Length = 164

 Score = 82.6 bits (195), Expect = 1e-15
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
 Frame = +2

Query: 413 RLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMGLTLCPLVWSTFFIF 574
           RL+VGLRWWN++D++GK HWVFE+R+     N      ESR+FW+GL  C ++W  F   
Sbjct: 85  RLMVGLRWWNHIDEDGKGHWVFESRKESSQENKTVSEAESRIFWLGLIACSVLWVIFAFS 144

Query: 575 CLFGLKFKWM 604
            LF    KW+
Sbjct: 145 ALFSFTVKWL 154


>BC067364-1|AAH67364.1|  871|Homo sapiens PRP40 pre-mRNA processing
           factor 40 homolog B (S. cerevisiae) protein.
          Length = 871

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +1

Query: 439 ELCGRQRQVALGVRGPSEPGQQEREPPVLDGPDAVPLGLV 558
           E  G+Q+Q       P  P  Q   PPV  GP  VP GL+
Sbjct: 177 EAAGKQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLL 216


>BC050398-1|AAH50398.1|  788|Homo sapiens PRPF40B protein protein.
          Length = 788

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +1

Query: 439 ELCGRQRQVALGVRGPSEPGQQEREPPVLDGPDAVPLGLV 558
           E  G+Q+Q       P  P  Q   PPV  GP  VP GL+
Sbjct: 177 EAAGKQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLL 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,616,877
Number of Sequences: 237096
Number of extensions: 1958920
Number of successful extensions: 5329
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5324
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)