Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29e09
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       29   0.027
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.5  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +3

Query: 546 CHKCHGVIDGEPLRYRGEV-YHGYH--FTCATCGVE 644
           C  C+ +  G+ + Y   + YHG+H  FTC  CGVE
Sbjct: 473 CQYCN-IAFGDAVLYTIHMGYHGFHNPFTCNMCGVE 507


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
 Frame = +3

Query: 243 NCFVCAQCFRMFPDGVFYE--------FEGRKYCEQDFQ 335
           NC    +C+ +F DG+  E        F+GR  CE+  Q
Sbjct: 527 NCTASTRCWEVFMDGICNEDCNNPECLFDGRD-CEESLQ 564


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 96  LIKTRFFSLPNASLFLATMSLDNMYCTR 179
           L+K   ++LP +++ +A + +DN  C R
Sbjct: 533 LLKRENYTLPASAVGIAWLYVDNDCCIR 560


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 451 SLQMPVLSSMLVEHCAMY 504
           +L +PVL S L+  C MY
Sbjct: 167 NLSVPVLLSGLIAMCGMY 184


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 451 SLQMPVLSSMLVEHCAMY 504
           +L +PVL S L+  C MY
Sbjct: 400 NLSVPVLLSGLIAMCGMY 417


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 451 SLQMPVLSSMLVEHCAMY 504
           +L +PVL S L+  C MY
Sbjct: 400 NLSVPVLLSGLIAMCGMY 417


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 452 LYITLFTSEAGRMPIRVHRLYNAANHK 372
           +Y    T+  GR+PI  + LY    HK
Sbjct: 314 VYDASITASLGRVPIWPYTLYFRMPHK 340



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 309 VPQIHRRHHQETCESTGHKQNNLY 238
           V  +HRR H+    S  HK++  Y
Sbjct: 235 VQDLHRRGHEIAVFSLTHKEDPNY 258


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 452 LYITLFTSEAGRMPIRVHRLYNAANHK 372
           +Y    T+  GR+PI  + LY    HK
Sbjct: 321 VYDASITASLGRVPIWPYTLYFRMPHK 347



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 309 VPQIHRRHHQETCESTGHKQNNLY 238
           V  +HRR H+    S  HK++  Y
Sbjct: 242 VQDLHRRGHEIAVFSLTHKEDPNY 265


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 9/24 (37%)
 Frame = +3

Query: 492 LCHVCNARIKADGLQNYMCHKCHG 563
           LC +C  R        Y C  C G
Sbjct: 85  LCSICGDRASGKHYGVYSCEGCKG 108


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 479 MLDKTGIC 456
           MLDKTGIC
Sbjct: 95  MLDKTGIC 102


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 210 IVNSNGELWHTNC 248
           ++N N  LW+ NC
Sbjct: 168 MINMNCALWYINC 180


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
 Frame = +3

Query: 492  LCHVCNARIKADGLQNYMCHKC----HGVID 572
            +CHVC + I+       + HK     H +ID
Sbjct: 925  ICHVCYSTIQEVSKSGELIHKIATNDHEIID 955


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 210 IVNSNGELWHTNC 248
           ++N N  LW+ NC
Sbjct: 168 MINMNCALWYINC 180


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 210 IVNSNGELWHTNC 248
           ++N N  LW+ NC
Sbjct: 168 MINMNCALWYINC 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,848
Number of Sequences: 336
Number of extensions: 4196
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)