Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29e08
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   5.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.4  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   9.8  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 606 VDLFTGASTIETISSLANQR 547
           VDLF G+ST E+     NQ+
Sbjct: 95  VDLFRGSSTPESPEHYYNQK 114


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 335 SVKLPSKVQTKLMEKFIARXXXXXXXXXXXXHHTLKTSKENLRKNLIKK 481
           S ++  KV  K  +KF  R             HTL  SK+ + +NL  K
Sbjct: 81  SPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLFISKDAVWRNLRTK 129


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 290 CRQTIVQTQHHLE*NSVKLPSKVQTKLMEKFIA 388
           C Q + + +H  + N   +PS+ Q  ++   IA
Sbjct: 355 CSQKVAEERHKTDINITTVPSEQQWGILVLIIA 387


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/33 (21%), Positives = 17/33 (51%)
 Frame = -2

Query: 601 LVYWGIYN*DYLLACESASHTRYHTSKDQLQGY 503
           ++ W +   D+  +C S  +   +  + +L+GY
Sbjct: 854 IMIWSVDMDDFRGSCGSGKYPLINAMRQELEGY 886


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 474 IKFFLRFSFDVFSVWC 427
           +KFF+ F   + +VWC
Sbjct: 1   MKFFIAFLMLLGAVWC 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,685
Number of Sequences: 336
Number of extensions: 2718
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)