Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29e08
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc...    31   1.1  
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac...    31   1.1  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    30   1.4  
AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AL132904-4|CAC35836.2|  582|Caenorhabditis elegans Hypothetical ...    28   5.7  
AF077542-1|AAC26295.2|  386|Caenorhabditis elegans Serpentine re...    28   5.7  
AC006629-9|ABC48255.1|  319|Caenorhabditis elegans Hypothetical ...    28   5.7  
AF078157-12|AAG24073.1|  338|Caenorhabditis elegans Hypothetical...    28   7.5  
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AL132949-17|CAB70108.2|  338|Caenorhabditis elegans Hypothetical...    27   9.9  
AL110487-8|CAB54423.1|  245|Caenorhabditis elegans Hypothetical ...    27   9.9  

>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
           transferase protein.
          Length = 1151

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 265 AQKLCNDIVQADDRPNTTPPRVKLSKITFQSTNKVNGKIYRSVTLE 402
           A+K CN + Q+D  PN  P  + LS I FQ+ N      Y  + ++
Sbjct: 144 AEKYCNLVFQSD--PNNLPTLLLLSAINFQTKNLEKSMQYSMLAIK 187


>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
           transferase protein1, isoform a protein.
          Length = 1151

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 265 AQKLCNDIVQADDRPNTTPPRVKLSKITFQSTNKVNGKIYRSVTLE 402
           A+K CN + Q+D  PN  P  + LS I FQ+ N      Y  + ++
Sbjct: 144 AEKYCNLVFQSD--PNNLPTLLLLSAINFQTKNLEKSMQYSMLAIK 187


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
           protein R11G1.1 protein.
          Length = 1656

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/67 (23%), Positives = 28/67 (41%)
 Frame = +1

Query: 409 KVTGKPAPHAENVKRKPEKKFNQKIFADIAVNTLVTGPLRCDNECVTLIRKRGDSLNCRC 588
           K T  P+     +  +    F     + +   T+ TG  + D +C+  +   G S+ C C
Sbjct: 588 KTTPTPSSGTSTIVTENSSTFESVSTSSVPTTTVKTGDPQVD-DCLRRMSDSGGSVICDC 646

Query: 589 PSKQVNN 609
           P+ Q  N
Sbjct: 647 PNGQFKN 653


>AC024751-3|AAK21513.2|  440|Caenorhabditis elegans Hypothetical
           protein Y18H1A.10 protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -3

Query: 414 DFPFF*SYRAINFSINFVCTLEGNFTEFHSRWCCVWTIVCLHYVIAKLLCTPGHLITEEE 235
           D P F  YR +  +  +     GN+ +F  R   +W +   + +I   +C  G L T++ 
Sbjct: 339 DAPQFEVYREMRENCRYRYRYRGNWEKFSRRTNLMWIVYIANRLIDTEICPEG-LFTDKR 397

Query: 234 RR 229
           R+
Sbjct: 398 RK 399


>Z81083-3|CAB03104.1|  559|Caenorhabditis elegans Hypothetical
           protein F44F1.4 protein.
          Length = 559

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +1

Query: 259 RRAQKLCNDIVQADDRPNTTPPRVKLSKIT--FQSTNKVNGKIYRSVTLEK 405
           +R  KLC DIVQ   +   +      +  T  F +TNKV      SVT EK
Sbjct: 236 QRCSKLCGDIVQVVSKTTGSYSTYNYTIYTGKFNNTNKVYCTSCNSVTSEK 286


>AL132904-4|CAC35836.2|  582|Caenorhabditis elegans Hypothetical
           protein Y111B2A.8 protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = +1

Query: 286 IVQADDRPNTTPPRVKLSKITFQST--NKVNGKIYRSV--TLEKRKVTGKPAPHAENVKR 453
           ++  DD P T PP  K  K  +  T  +K +G + R++     KR+     A H    + 
Sbjct: 29  VISVDDEPTTAPPVTKPVKKGWIKTAKSKASGTLRRTLFGRSTKRRAKDAEAIHEAGEEE 88

Query: 454 KPEKKFNQ 477
           + E+ + Q
Sbjct: 89  EDEEDYTQ 96


>AF077542-1|AAC26295.2|  386|Caenorhabditis elegans Serpentine
           receptor, class w protein66 protein.
          Length = 386

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 534 ITPQRTSYKGINCNVCKDFLIKFFLRFSFDVFS 436
           IT + TS+ G+   + + F+IKF L   FD  S
Sbjct: 121 ITRRMTSFFGVLMTIVRFFIIKFALNRKFDTIS 153


>AC006629-9|ABC48255.1|  319|Caenorhabditis elegans Hypothetical
           protein F12E12.10 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 523 LRCDNECVTLIRKRGDSLNCRCPSKQVNN 609
           +   N  V +I   G+S NCR P   +NN
Sbjct: 56  IEISNRLVVIIALHGESFNCRIPLNGLNN 84


>AF078157-12|AAG24073.1|  338|Caenorhabditis elegans Hypothetical
           protein F25E5.2 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -3

Query: 408 PFF*SYRAINFSINF---VCTLEGNFTEFHSRWCC 313
           PF   YR  NF       +C ++GNF E ++  CC
Sbjct: 94  PFADGYRTDNFIPKHNLAICEIKGNFPELNAAICC 128


>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical protein
            M18.5 protein.
          Length = 1134

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/35 (34%), Positives = 14/35 (40%)
 Frame = -3

Query: 354  LEGNFTEFHSRWCCVWTIVCLHYVIAKLLCTPGHL 250
            LEGNF E    W   W + C       +L    HL
Sbjct: 933  LEGNFEEVAKDWNSQWMVTCEFITAESILGGEAHL 967


>AL132949-17|CAB70108.2|  338|Caenorhabditis elegans Hypothetical
           protein Y53F4B.19 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 22/83 (26%), Positives = 39/83 (46%)
 Frame = +1

Query: 253 MSRRAQKLCNDIVQADDRPNTTPPRVKLSKITFQSTNKVNGKIYRSVTLEKRKVTGKPAP 432
           M R  QKL +     +D+  T   +V  + + F   N+V  ++ ++  +EK K+   P P
Sbjct: 193 MMRAKQKLLDYRKDENDKIKTF--QVDFNNVIFDHRNRVLDRMLKANVVEKEKLLYMPTP 250

Query: 433 HAENVKRKPEKKFNQKIFADIAV 501
              N+    +   NQK  + +AV
Sbjct: 251 ---NLNLYMQNLRNQKNRSKLAV 270


>AL110487-8|CAB54423.1|  245|Caenorhabditis elegans Hypothetical
           protein Y39E4B.11 protein.
          Length = 245

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 379 IYRSVTLEKRKVTGKPAPHAENVKRKPEK 465
           +Y ++ ++KRK   KP    EN KR+  K
Sbjct: 200 LYETLEMQKRKTIAKPGVVIENFKRENNK 228


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,410,000
Number of Sequences: 27780
Number of extensions: 252515
Number of successful extensions: 655
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)