Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d23
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.4  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = -1

Query: 191  IARLQKI---NCQKFFSYHYRNNLHCI*E*NKWNTSNANFH*IINLVNFLDILHQNIKYR 21
            + RLQ +   +C    S H R N +   + +       N H + N+V+  D+L  N+K+ 
Sbjct: 3333 LQRLQSVLREHCATDSSVHVRRNANS--KIDFLYAGQTNSHKVQNVVSAFDLLGDNVKFN 3390

Query: 20   LSILS 6
              + S
Sbjct: 3391 AILQS 3395


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 443 LKFLARAGRPFSRRVLVRP 387
           L FLAR GRP  + + VRP
Sbjct: 728 LHFLARVGRPGWKWMSVRP 746


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 350  STQVVANSLKPLVVVPTPSEKTVVLPLPKTSTVET 454
            ST  +A ++ P  V  +PS  T   P   TST  T
Sbjct: 928  STSAMAATIVPNPVQASPSPATAPAPAKTTSTDST 962


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,909
Number of Sequences: 2352
Number of extensions: 14598
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)