Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d23
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p pro...    50   2e-06
AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,...    50   2e-06
AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,...    50   2e-06
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA...    29   8.6  

>BT010222-1|AAQ23540.1|  260|Drosophila melanogaster RH01528p
           protein.
          Length = 260

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +2

Query: 479 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 643
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLM 73


>AE014134-274|AAF51354.3|  230|Drosophila melanogaster CG7361-PB,
           isoform B protein.
          Length = 230

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +2

Query: 479 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 643
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLM 73


>AE014134-273|AAF51353.1|  260|Drosophila melanogaster CG7361-PA,
           isoform A protein.
          Length = 260

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = +2

Query: 479 GLKVKAGTRVPAQV-RFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLI 643
           GLK  +G  V +   R AHTD+  PDFSAYRR+  +D + + N+T +ER++F+YL+
Sbjct: 20  GLKA-SGVAVNSMANRQAHTDLQVPDFSAYRRESVKD-SRRRNDTAEERKAFSYLM 73


>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
            protein.
          Length = 4010

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 151  EKNF*QLIFCNLAIFFSDIDNKIDVSFLDRTPALRKVVKK*LFAY-NLSKQ 300
            E +F QLI+C+     +D  N ++V  L+    LR+VV+  L  Y N+SK+
Sbjct: 2229 ESDFRQLIYCDFTNPKADTKNYVEVQDLEE---LRRVVEAYLVEYNNMSKK 2276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,391,201
Number of Sequences: 53049
Number of extensions: 601314
Number of successful extensions: 1470
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)