Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d20
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938...    29   2.8  
06_02_0158 + 12410872-12411183,12413512-12413604,12413692-12413877     29   4.8  
02_03_0144 + 15694766-15694883,15694980-15697612                       29   4.8  
01_05_0243 - 19842222-19842502,19842581-19842998                       28   8.5  

>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
            9387180-9387325,9387416-9387572,9387720-9387778,
            9388204-9388360,9389001-9389150,9389280-9389416,
            9390071-9390217,9390292-9390393,9390742-9390799,
            9391997-9392034,9392124-9392250,9392320-9392493,
            9393125-9393256,9393940-9394049,9394752-9394812,
            9395036-9395213,9395326-9395531,9395796-9395915,
            9396496-9396594,9396983-9397204,9397482-9397621,
            9397741-9397852,9398021-9398071,9398151-9398240,
            9398397-9398567,9398663-9398815,9399774-9399950,
            9400045-9400182,9400295-9400365,9400739-9400838,
            9401324-9401380,9401469-9401525,9401619-9401699,
            9401782-9401864,9401975-9402110
          Length = 1632

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 188  LISPEKILLPPLHIKLGMMKQFVKALDKNNASFEYLCKKNPRLSDAKIKGVFD 346
            ++   KI+      +   +K  V++L KNN+S EY      + SDA +K + D
Sbjct: 1075 MLRSSKIMTAEAERENSNLKNLVESLSKNNSSLEYELTSARKGSDATMKKLKD 1127


>06_02_0158 + 12410872-12411183,12413512-12413604,12413692-12413877
          Length = 196

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 560 HVNLESGVLCSYYT 519
           H  L+SGVLCSYYT
Sbjct: 106 HKQLKSGVLCSYYT 119


>02_03_0144 + 15694766-15694883,15694980-15697612
          Length = 916

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/74 (22%), Positives = 33/74 (44%)
 Frame = +2

Query: 254 VKALDKNNASFEYLCKKNPRLSDAKIKGVFDGPQIRSLMADEKFDATMNNTESDAWLA*D 433
           +K +D+       LC K    +  ++KG+   PQ+ S   D+       N ++D+  +  
Sbjct: 604 LKKIDELRDQLNRLCSKKRLENRYRMKGLEYQPQLSSYYVDQH----SQNVDADSIQSSS 659

Query: 434 VVNNFLGNNKHPDY 475
            + ++  N K P Y
Sbjct: 660 TLGSYYWNGKQPSY 673


>01_05_0243 - 19842222-19842502,19842581-19842998
          Length = 232

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 98  SIARDKHYVQK*WNPRKNLKVETKNVIQKNLISPEKIL 211
           ++ARDK   +  WN    L    K+V++K  I  E++L
Sbjct: 168 AVARDKRAQRAVWNTNLRLLEVKKSVLEKKKIELERVL 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,199,440
Number of Sequences: 37544
Number of extensions: 342361
Number of successful extensions: 757
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)