Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d20
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.8  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   9.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.5  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 691 PAVISHNIHIPSTLVPCLHSFYVLVKPFSLLFTV 590
           P  +S  I    +L  C+ SF + +KP  LLF +
Sbjct: 191 PPQLSSEISTLRSLHDCISSFTLRLKPSDLLFVI 224


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 667 HIPSTLVPCLHSFYVLVKPFSLL 599
           ++P TL P +H  Y++ K +  L
Sbjct: 43  NVPDTLKPTIHFAYIIEKLYKRL 65


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 394 CGIKFFISHQRSDLRSIEHSFN 329
           CG+++  SH+  +LR+   +FN
Sbjct: 2   CGLRWTSSHRAHELRTSGFAFN 23


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,264
Number of Sequences: 2352
Number of extensions: 15249
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)