Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d20
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49966-4|CAA90244.1|  360|Caenorhabditis elegans Hypothetical pr...    31   0.62 
AC090999-22|AAK26159.1|  481|Caenorhabditis elegans Hypothetical...    29   4.4  
U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine rece...    28   5.8  
U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical pr...    28   5.8  
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF125448-5|AAD12810.1|  188|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z49966-4|CAA90244.1|  360|Caenorhabditis elegans Hypothetical
           protein F35C11.4 protein.
          Length = 360

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
 Frame = -1

Query: 459 LFPRKLLTTSHASQASDSVLFIVASNFSSAIKDLICGPSNTPL-IFASDNLGFFLHRYSK 283
           LFP+KLLT     QA +     +A         L   P++  + + ASD    FL++   
Sbjct: 43  LFPKKLLTND---QALNQHRIKIADGIFKNFTKLTATPTSVEIRVVASDRGNNFLYQ--- 96

Query: 282 LALFLSNALTNCFIIPSLI*SGGSKIFSGLIKFFCITFFVSTL 154
             +FL       F     I +  SKIFS L+KF  I   V T+
Sbjct: 97  TVIFLLEQQYGTFNYSLSICNVESKIFSDLLKFNSIEIPVYTV 139


>AC090999-22|AAK26159.1|  481|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.17a protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
 Frame = +2

Query: 434 VVNNFLGNNKHPDYKNKVANLLDKY---------QKLGCNMNIKLHFLDSHVDF 568
           ++ NF      P    +V N ++++         +K+ C MN+KL + D H DF
Sbjct: 118 ILGNFWKTYSEPRIAEEVLNTIERFCVITMGRYVRKILCYMNVKLDWFDFHFDF 171


>U50300-1|AAC48108.2|  349|Caenorhabditis elegans Serpentine
           receptor, class x protein3 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -3

Query: 172 VFCFYFEIFTRIPLFLNVVLVSCYTVPH 89
           +F +YFE FT+I + LN  LV C    H
Sbjct: 93  LFFWYFETFTQIVMALNRYLVICLQKHH 120


>U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical
           protein C56E10.3 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +2

Query: 257 KALDKNNASFEYLCKKNPRLSDAKIKGVFDGPQI--RSLMADEKFDATMNNTES 412
           K LDK    +E LCKK  +L   K +   +  Q+  +S   D+ F     N E+
Sbjct: 43  KQLDKKCGEYEQLCKKTAKLKAEKSRLDVESTQLTAQSDEIDQSFTKVEQNAEA 96


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
 Frame = +2

Query: 470 DYKNKVANLLDKYQKLGCNMNI--KLHFLDSHVDFF--PDNLGDYSKEQG-ERFHQDIKT 634
           D+   + NL    + L  +M +  KLH L +H++ +         + EQG E FH   +T
Sbjct: 730 DFAKTLKNLKRNIRILHPSMGVTPKLHILCTHLEPYIRAKRTWGRTSEQGMEAFHVLFRT 789

Query: 635 METRYQCRWNVNIMAD 682
            ETR+    ++ + A+
Sbjct: 790 TETRFSSVMSLKLRAE 805


>AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical
           protein Y26D4A.10 protein.
          Length = 546

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +2

Query: 488 ANLLDKYQKLGCNMNIKLHFLDSHVDFFPDNLGDYSKEQGE 610
           A++L+K  +   +   K+H  D H +F   N  DY  E  +
Sbjct: 491 ADILEKRARALEDQKCKIHPTDDHTNFSRSNFSDYPNEYAD 531


>AF125448-5|AAD12810.1|  188|Caenorhabditis elegans Hypothetical
           protein H14E04.3 protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 35  IYFFNF-FYLYTKFPCFLCVWDSIARDKHYVQK*WNPRKNLKVETKNVIQK 184
           I+FFN    LY     F+CV+  +   K + +   + RKN K+E KNVI+K
Sbjct: 128 IHFFNIPISLY-----FICVF--LVSSKTHKRTTRSGRKNKKIEDKNVIKK 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,002,241
Number of Sequences: 27780
Number of extensions: 356498
Number of successful extensions: 1149
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)