Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d18
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XZA8 Cluster: Putative uncharacterized protein; n=5; ...    36   1.00 
UniRef50_A6S6Z5 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q9H239 Cluster: Matrix metalloproteinase-28 precursor; ...    34   4.0  
UniRef50_Q4H3K0 Cluster: Transcription factor protein; n=1; Cion...    33   7.0  
UniRef50_Q16LX9 Cluster: Putative uncharacterized protein; n=1; ...    33   9.3  

>UniRef50_Q4XZA8 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1875

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
 Frame = +3

Query: 339 SKVCHESDESLPIDENKQLYQSILFPMNIRLLMKTIKLNPICILIYKKENSTQ--LFGET 512
           +K  ++ +  L + ENK+   S ++ +N   L   I+ + ICI I+  EN T+  + G  
Sbjct: 41  TKQNNDKEPDLYLVENKEKLNSPIYELNYSNLFSMIQYSSICITIFVNENETKDNIIGII 100

Query: 513 KIPWD--PMTYDYLSKLLHGDN--PESVQFSADCYGPSNHSAECIVIFKVNIRLALVNDN 680
            I +D  P   +  S+   GDN    S  F  +      + +  + I K NI ++ +N N
Sbjct: 101 SIDYDLLPQFENEESESYLGDNKLENSNYFYNELSLDDFYYSLSLYIKKYNI-VSNLNSN 159

Query: 681 TCNILN 698
              I+N
Sbjct: 160 NTLIIN 165


>UniRef50_A6S6Z5 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 516

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = +3

Query: 192 FLFEITANSFKTGSSDKEFLLKVKFADVFTIDLSSIHS----SNKGRRKKTRKSKVCHES 359
           FL     + F    S K+FLLK     +F  D+S +H+    ++     KT K  +    
Sbjct: 370 FLIIREQSIFFVHQSAKDFLLKKATKTIFPNDISEVHNKVFLNSMTAMSKTLKQDIYDLQ 429

Query: 360 DESLPIDENKQLYQSILFPM 419
               PIDE KQL    L P+
Sbjct: 430 YSGFPIDEVKQLDPDPLTPI 449


>UniRef50_Q9H239 Cluster: Matrix metalloproteinase-28 precursor;
           n=25; Euteleostomi|Rep: Matrix metalloproteinase-28
           precursor - Homo sapiens (Human)
          Length = 520

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 306 SNKGRRKKTRKSKVCHESDESLPIDENKQLY 398
           S +GRR +T+  K CH S +++ +D  +QLY
Sbjct: 310 SPQGRRPETQGPKYCHSSFDAITVDRQQQLY 340


>UniRef50_Q4H3K0 Cluster: Transcription factor protein; n=1; Ciona
           intestinalis|Rep: Transcription factor protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 301

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +3

Query: 318 RRKKTRKSKVCHESDESLPIDENKQLYQSILFPMNIRLLMKTIKLNPICILIYKKENSTQ 497
           R   T  S  CH +D S  ++ N++ Y S  FP+ I          P C++I KKEN  Q
Sbjct: 192 RNSATSPSPSCHSNDSSQGVESNERNYSS--FPLPI---------PPQCMVIPKKENPMQ 240

Query: 498 L 500
           L
Sbjct: 241 L 241


>UniRef50_Q16LX9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 240

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
 Frame = +3

Query: 210 ANSFKTGSSDKEFLLKVKFADVFTIDLSSIHSS-NKGRRKKTRKSKVCHESDESLPIDEN 386
           A S +  SS K  L+ V FAD    D ++   +  K ++KK+ + K   ES      D+ 
Sbjct: 25  AQSKEIFSSGKNILVSVSFADGDHEDAAAAERAYRKAKKKKSSRKKAKGESKHK---DDR 81

Query: 387 KQLYQSILFPMNIRLLMKTI--KLNPICILIYKKENSTQLFGETK 515
           K+  +S+ +P   +   + +   + P+ I+  ++    QL    K
Sbjct: 82  KKHDESLEYPSTSQRKKRKVDENIKPVAIIDLERSPGKQLISSPK 126


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,864,287
Number of Sequences: 1657284
Number of extensions: 12466622
Number of successful extensions: 29295
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29282
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)