Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d18
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002631-1|AAH02631.1|  393|Homo sapiens MMP28 protein protein.        34   0.58 
AY358987-1|AAQ89346.1|  520|Homo sapiens metalloprotease protein.      34   0.58 
AF330002-1|AAK01706.1|  520|Homo sapiens matrix metalloprotease ...    34   0.58 
AF315683-1|AAG41981.1|  520|Homo sapiens matrix metalloproteinas...    34   0.58 
AF219624-1|AAK01480.1|  520|Homo sapiens matrix metalloproteinas...    34   0.58 
BC000573-1|AAH00573.1|  139|Homo sapiens cornichon homolog 4 (Dr...    30   7.2  
AK222634-1|BAD96354.1|  139|Homo sapiens HSPC163 protein variant...    30   7.2  

>BC002631-1|AAH02631.1|  393|Homo sapiens MMP28 protein protein.
          Length = 393

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 306 SNKGRRKKTRKSKVCHESDESLPIDENKQLY 398
           S +GRR +T+  K CH S +++ +D  +QLY
Sbjct: 310 SPQGRRPETQGPKYCHSSFDAITVDRQQQLY 340


>AY358987-1|AAQ89346.1|  520|Homo sapiens metalloprotease protein.
          Length = 520

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 306 SNKGRRKKTRKSKVCHESDESLPIDENKQLY 398
           S +GRR +T+  K CH S +++ +D  +QLY
Sbjct: 310 SPQGRRPETQGPKYCHSSFDAITVDRQQQLY 340


>AF330002-1|AAK01706.1|  520|Homo sapiens matrix metalloprotease
           MMP25 protein.
          Length = 520

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 306 SNKGRRKKTRKSKVCHESDESLPIDENKQLY 398
           S +GRR +T+  K CH S +++ +D  +QLY
Sbjct: 310 SPQGRRPETQGPKYCHSSFDAITVDRQQQLY 340


>AF315683-1|AAG41981.1|  520|Homo sapiens matrix metalloproteinase
           28 protein.
          Length = 520

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 306 SNKGRRKKTRKSKVCHESDESLPIDENKQLY 398
           S +GRR +T+  K CH S +++ +D  +QLY
Sbjct: 310 SPQGRRPETQGPKYCHSSFDAITVDRQQQLY 340


>AF219624-1|AAK01480.1|  520|Homo sapiens matrix
           metalloproteinase-28 precursor protein.
          Length = 520

 Score = 33.9 bits (74), Expect = 0.58
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +3

Query: 306 SNKGRRKKTRKSKVCHESDESLPIDENKQLY 398
           S +GRR +T+  K CH S +++ +D  +QLY
Sbjct: 310 SPQGRRPETQGPKYCHSSFDAITVDRQQQLY 340


>BC000573-1|AAH00573.1|  139|Homo sapiens cornichon homolog 4
           (Drosophila) protein.
          Length = 139

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 179 KSHFLKTLSNTGFFLNCFLVNLYHMIFSL 93
           KSH  + +   GF L CF + LY MI +L
Sbjct: 108 KSHMKEAMIKLGFHLLCFFMYLYSMILAL 136


>AK222634-1|BAD96354.1|  139|Homo sapiens HSPC163 protein variant
           protein.
          Length = 139

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 179 KSHFLKTLSNTGFFLNCFLVNLYHMIFSL 93
           KSH  + +   GF L CF + LY MI +L
Sbjct: 108 KSHMKEAMIKLGFHLLCFFMYLYSMILAL 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,993,049
Number of Sequences: 237096
Number of extensions: 1759277
Number of successful extensions: 2724
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)