Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d16
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    25   0.72 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    25   0.72 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   0.96 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.9  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 247 NIVKTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLP 426
           +I K  ++   IN++  DF            +  + A H ++ DEQ  ++     +Y L 
Sbjct: 193 DIAKVAENLDMINVMAYDFHGAF--EPFVGHYAPLYASHLDQTDEQKTLNVAAGIQYWLD 250

Query: 427 QGSQPNKITSTLSADG 474
           +G+ P+KI   L + G
Sbjct: 251 EGAPPSKINLGLGSYG 266


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 247 NIVKTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLP 426
           +I K  ++   IN++  DF            +  + A H ++ DEQ  ++     +Y L 
Sbjct: 193 DIAKVAENLDMINVMAYDFHGAF--EPFVGHYAPLYASHLDQTDEQKTLNVAAGIQYWLD 250

Query: 427 QGSQPNKITSTLSADG 474
           +G+ P+KI   L + G
Sbjct: 251 EGAPPSKINLGLGSYG 266


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 19/76 (25%), Positives = 34/76 (44%)
 Frame = +1

Query: 247 NIVKTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRKYKLP 426
           +I K  ++   IN++  DF            +  + A H ++ DEQ  ++     +Y L 
Sbjct: 192 DIAKVAENLDMINVMAYDFHGAF--EPFVGHYAPLYASHLDQTDEQKTLNVAAGIQYWLD 249

Query: 427 QGSQPNKITSTLSADG 474
           +G+ P+KI   L   G
Sbjct: 250 EGAPPSKINLGLGTYG 265


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 256 KTQKDRLEINLLVKDFAAEQIQVKVA 333
           K +  R  +NL+   F    I VK+A
Sbjct: 338 KEESSRQAVNLICDKFERSNIGVKIA 363


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 256 KTQKDRLEINLLVKDFAAEQIQVKVA 333
           K +  R  +NL+   F    I VK+A
Sbjct: 338 KEESSRQAVNLICDKFERSNIGVKIA 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,845
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)