Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d16
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   100   5e-23
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.7  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    24   4.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.5  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  100 bits (239), Expect = 5e-23
 Identities = 46/104 (44%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
 Frame = +1

Query: 238 HD-GNIVKTQKDRLEINLLVKDFAAEQIQVKVADDFIVIEAKHEEKKDEQGFISRHFVRK 414
           HD G+ V   KD+ +INL V+ F+ E+I VK  D+ +++E KHEEK+D+ G++SRHFVR+
Sbjct: 2   HDSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRR 61

Query: 415 YKLPQGSQPNKITSTLSADGVLKIVVPKETAVLK--DTAIPVAY 540
           Y LP+G     I S+LS+DG+L I  P++    K  + +IP+ +
Sbjct: 62  YMLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITH 105


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 421 LPQGSQPNKITSTLSADGVLKIVVPKETAVL 513
           +PQGS        +  DGVL+I +P E  V+
Sbjct: 645 VPQGSILGPTLWNVMYDGVLRIPLPDEAKVI 675


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   IQRHLXKTYKNSKTATNIIMYL 67
           + R L K   N K A N+IM+L
Sbjct: 86  LDRQLHKNRLNRKVAKNVIMFL 107


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 344  IKSSATFT*ICSAAKSLTSKL 282
            ++S   ++ +C AAK +TSKL
Sbjct: 997  LQSPTNWSNVCEAAKRITSKL 1017


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 421 LPQGSQPNKITSTLSADGVLKIVVPKETAVL 513
           +PQGS        +  DGVL++ +P+  +V+
Sbjct: 632 VPQGSILGPTLWNIMYDGVLRVELPEGASVI 662


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,424
Number of Sequences: 2352
Number of extensions: 10860
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)