Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d15
         (184 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    20   2.0  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      18   8.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    18   8.1  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 2   VGYDDFKIXRLLSFLLNEAFDXXKTAR 82
           V YD   +   L F++ EAFD    AR
Sbjct: 227 VYYDPRALSPNLEFVVLEAFDFYTPAR 253


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 76 CESADSQW 99
          CE  DS+W
Sbjct: 11 CEGKDSKW 18


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 155 VSLSHLCIIFAYF 117
           VSL  L  +F YF
Sbjct: 138 VSLLQLVFVFCYF 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,790
Number of Sequences: 336
Number of extensions: 317
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 40
effective length of database: 109,145
effective search space used:  2182900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)