Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29d12
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 66 6e-12
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 44 2e-05
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 43 4e-05
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 41 1e-04
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 40 3e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 6e-04
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 39 8e-04
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 37 0.003
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 36 0.004
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 33 0.029
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 32 0.066
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 28 1.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.4
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 27 1.9
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 27 1.9
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 4.3
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 26 4.3
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 4.3
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 26 5.7
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 7.6
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 25 10.0
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 65.7 bits (153), Expect = 6e-12
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +2
Query: 296 DLKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTC--LKPDSLRLY 469
DL K L+TG++ G+G L G V +A RN V K ++ +R
Sbjct: 39 DLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98
Query: 470 ELNLASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWTETVDKLEITFQVNYLSQY 640
L+L SV + ++ + KE+K+ I++ NAGI P+ T D E+ Q NYLS Y
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYLSHY 155
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/89 (25%), Positives = 46/89 (51%)
Frame = +2
Query: 305 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 484
+K I G N G+GL + K L+ TV+ A A+ + ++ + +L+++
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIKLDIS 64
Query: 485 SLRSVRKCSDDLLNKEKKIDIVILNAGIF 571
SL S + + ++ K+D++ +N+GIF
Sbjct: 65 SLESANEAAQEVAKAVGKVDVLWVNSGIF 93
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 43.2 bits (97), Expect = 4e-05
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Frame = +2
Query: 317 LITGANSGVGLEMTKCL-NLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLASLR 493
+I G N G+GL + K L N G TV + R +AS + K+ ++ + +L++ SLR
Sbjct: 10 VIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASEL-KDWSKTHSNVHIIKLDVTSLR 68
Query: 494 SVRKCSDDLLNKEKKIDIVILNAGIFG--LPWTETVDKLEIT-FQVNYLSQYYL 646
S + + + K ID++ +N+GI P +T D+L ++ +Q N L ++
Sbjct: 69 SAKDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHV 122
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 41.1 bits (92), Expect = 1e-04
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 281 VTKGLDLKDKTCLITGANSGVGLEMTKCLNLCGCTV-LMACRNTYAASVVAKNTCLKPDS 457
+T LK KT LITG + G+G + K G V L+ RN A A+
Sbjct: 1 MTSMFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQ 60
Query: 458 LRLYELNLASLRSVRKCSDDLLNK-EKKIDIVILNAGIFGLPWTETVDKLE 607
+ Y + + +V + ++ + + ++D++I NAGI +P DK E
Sbjct: 61 AKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGI-AIPHLSLEDKNE 110
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 39.9 bits (89), Expect = 3e-04
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +2
Query: 305 DKTCLITGANSGVGLEMTKCLNLC-GCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNL 481
+K I G N G+GL + K L+ G TV + R AA+ + + + P +++ EL++
Sbjct: 5 NKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHP-NVKTVELDV 63
Query: 482 ASLRSVRKCSDDLLNKEKKIDIVILNAGI 568
S +S + + + ID++ LN+GI
Sbjct: 64 TSQQSANEAAQSVAKAVDGIDVLWLNSGI 92
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 39.1 bits (87), Expect = 6e-04
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 299 LKDKTCLITGANSGVGLEMT-KCLNLCGCTVLMACRNTYAASVVAKNTCLKPD-SLRLYE 472
L KT LITGA+SG+G + + +++A R +AK K + S+ +
Sbjct: 4 LDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLK 63
Query: 473 LNLASLRSVRKCSDDLLNKEKKIDIVILNAGI 568
L+++ L+S+ + L + ID++I NAG+
Sbjct: 64 LDVSDLKSIPGVIESLPKEFADIDVLINNAGL 95
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 38.7 bits (86), Expect = 8e-04
Identities = 20/89 (22%), Positives = 44/89 (49%)
Frame = +2
Query: 305 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 484
+K I G N G+GL + K L+ TV+ A A+ + ++ + +L+++
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVS 64
Query: 485 SLRSVRKCSDDLLNKEKKIDIVILNAGIF 571
SL S + + ++ +D++ +N+ +F
Sbjct: 65 SLESANEAAQEVTKVVDAVDVLWVNSAVF 93
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 36.7 bits (81), Expect = 0.003
Identities = 30/143 (20%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Frame = +2
Query: 269 TGEEVTKGLDLKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACR---NTYAASVVAKNT 439
+G T + ++TG +SG+G + + L G V++ R + + +
Sbjct: 63 SGRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQFTVDYIMDLR 122
Query: 440 CLKPDSLRLYEL-NLASLRSVRKCSDDLLN--KEKKIDIVILNAGIFGLPWTE---TVDK 601
+ L E+ +L+S+ SVRK + ++ +++D+++L +G+ P+ + T +
Sbjct: 123 KRTKNQLIYTEVCDLSSMLSVRKFATKWIDCTPIRRLDMIVLCSGVLLPPFMDRQTTEEG 182
Query: 602 LEITFQVNYLSQYYLLMNIEDIL 670
+E+ + N+L Y LL + ++
Sbjct: 183 VELQWATNFLGPYQLLRILRPVI 205
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 36.3 bits (80), Expect = 0.004
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Frame = +2
Query: 308 KTCLITGANSGVGLEM-TKCLNLCG---------CTVLMACRNTYAASVVAKNTC-LKPD 454
K LITG+NSG+G + T+ L TV++ CR+ A + PD
Sbjct: 5 KYALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPD 64
Query: 455 S---LRLYELNLASLRSVRKCSDDLLNKEKKIDIVILNAGIF---GLPWTETV 595
L L+L+++ SV D+ + K+D V LNAG + G+ W + +
Sbjct: 65 RKIRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNAGAWDLEGIQWLKAI 117
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 33.5 bits (73), Expect = 0.029
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +2
Query: 311 TCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLASL 490
T LITG++ G+G + K G V+ AC + + LK +L++ +
Sbjct: 7 TVLITGSSKGLGYALVKVGLAQGYNVI-ACSRAPDTITIEHSKLLK------LKLDVTDV 59
Query: 491 RSVRKCSDDLLNKEKKIDIVILNA--GIFGLPWTETVDKLEITFQVNYLSQYYL 646
+SV D + +DIVI NA G+ G + ++++ VN+ Y+
Sbjct: 60 KSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYI 113
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 32.3 bits (70), Expect = 0.066
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Frame = +2
Query: 299 LKDKTCLITGANSGVGLEMTKCLNLCGCTVL---MACRNTYAASVVAKNTCLKPDSLRLY 469
LK K C++ GA G+G + G V+ + T A +A+ T ++ +L+
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLK-- 76
Query: 470 ELNLASLRSVRKCSDDLLNKEKKIDIVILNAGI 568
++++ +V +++ K+I +V+ NAG+
Sbjct: 77 -IDISRSDTVEAGVEEIQKIFKEIHVVVANAGM 108
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 236 YFDLNFRIHGPTGEEVTKGLDLKDKTCLITGANSGVGLEMTKCL 367
YFD NF + ++V KGL TC+ SG G ++ L
Sbjct: 1247 YFD-NFTVQYAEAKDVIKGLLFSILTCIYNRITSGQGFSYSRLL 1289
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.9 bits (59), Expect = 1.4
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +2
Query: 431 KNTCLKPDSLRLYELNLASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWTETVDKLEI 610
+N LK D R YE LASL S ++ LNK K+ ++VI I TE D+L
Sbjct: 1033 ENASLK-DQCRTYESQLASLVSKYSETESELNK-KEAELVIFQKEI-----TEYRDQLHK 1085
Query: 611 TFQ 619
FQ
Sbjct: 1086 AFQ 1088
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 516 SSEHFRTDLSEARFNS*SRRLSGLRHVFLATTLAAYVFRHAMRTVHPHK 370
+S ++ T L + F LS RH + + Y R A RTV PHK
Sbjct: 2 ASHNYETPLKSSSFQHLVGTLSQRRH--FTPSRSRYTPRSAQRTVTPHK 48
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 305 DKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLRLYELNLA 484
+K L+TG++ G+GL + L + ++ T + PDS +
Sbjct: 6 EKVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETL---LIQNPDSFVHVK---G 59
Query: 485 SLRSVRKCS-DDLLNKEKKIDIVILNAGI 568
+ V K S + + K K+D VILNAG+
Sbjct: 60 DVTEVGKASIETAIKKFGKLDSVILNAGV 88
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 IHGPTGEEVTKGLDLKDKTCLITGANSGV---GLEMTKCLNLCGCTVLMACRNTYAASVV 427
+ G G + ++ + C+ G ++ + LE + L + + T+ +++
Sbjct: 613 LRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNIL 672
Query: 428 AKNTCLKPDSLRLYELNLASLRSVRKC 508
+ SLR+++LN S R + KC
Sbjct: 673 VSASAPPDTSLRVWDLNTGSCRDILKC 699
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 161 TTRNLILNDKVRAFSSSKVKSLVENYFDLNFRIHGPTGEEVT 286
T R+++LNDK+ A S ++S ++ L+ + ++T
Sbjct: 395 TIRSMLLNDKLSATQRSSLESFYTSFISLDKNLSSKFVNQIT 436
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 26.2 bits (55), Expect = 4.3
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +2
Query: 299 LKDKTCLITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAKNTCLKPDSLR--LYE 472
L +K L+TG +SG+G G ++++C ++ + ++E
Sbjct: 40 LAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGRNCWIWE 99
Query: 473 LNLASLRSVRKCSDDLLNKEKKIDIVILNAGIFGLPWT-ETVD--KLEITFQVNYLSQYY 643
L + R D L K ID+++ N + + E +D + ++TF+ N S ++
Sbjct: 100 GKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFW 159
Query: 644 L 646
+
Sbjct: 160 V 160
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 317 LITGANSGVGLEMTKCLNLCGCTVLMACRNTYAASVVAK 433
++TGA G+G E L + G V++ R +AK
Sbjct: 61 VVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAK 99
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -3
Query: 351 SKPTPLFAPVIKHVLSFKSRPFVTSSPVGPCI 256
S P P APV+ V S RP V P P +
Sbjct: 633 SVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 521 LNKEKKI-DIVILNAGIFGLPWTETVDKLEITFQVNYLSQY 640
+ KE K DIVI+ AG+ GL + L + ++ +++Y
Sbjct: 1 MTKENKPRDIVIVGAGVIGLTTAWILSDLGLAPRIKVIAKY 41
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,740,950
Number of Sequences: 5004
Number of extensions: 55279
Number of successful extensions: 162
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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