Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d12
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione S-tran...    24   5.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   8.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.8  

>AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione
           S-transferase D8 protein.
          Length = 224

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 381 ALSSWRAGTRMLQASSLKIHASNPIVYDFTN*ILLHLDL 497
           A+S+W  G +   A   +I+ S    Y  T+ ++ HL L
Sbjct: 179 AISAWYEGCKATMADFQEINESGMQQYRLTSSLVPHLQL 217


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 447 LRHVFLATTLAAYVFRHAMRTVHP 376
           LRH  L  T+ A +F H + T  P
Sbjct: 373 LRHFLLQLTIVAVLFAHWLTTRPP 396


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 485 SLRSVRKCSDDLLNKEKKIDIVILNAG 565
           S R+ RK  ++LLN  +++ +++LN G
Sbjct: 131 SARTKRK-GEELLNTVEQLGLIVLNRG 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,997
Number of Sequences: 2352
Number of extensions: 13968
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)