Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d07
         (483 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine rec...    30   1.0  
Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p...    27   5.4  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    27   9.4  
AF003146-6|ABS83849.1|  233|Caenorhabditis elegans Skn-1 depende...    27   9.4  

>U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 40 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -3

Query: 256 IQLNVFSQNFHIFIFYEQFLDNQGHLNNLRIILLFV----IWRQKYIGEQRH 113
           +Q   F Q + IF++Y     N G  N + I+ L V    +WR+K+ G  RH
Sbjct: 277 LQYYNFFQEYEIFLYYAIDWVNAG--NTVAIVPLTVALEPVWRRKFFGNIRH 326


>Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical
           protein T20F10.2c protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 286 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 170
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 18  NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 59


>Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical
           protein T20F10.2b protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 286 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 170
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 127 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 168


>Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical
           protein T20F10.2a protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 286 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 170
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 147 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 188


>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
            H05L14.2 protein.
          Length = 2162

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 75   LDVSDIFFLISLVFVSETIFSRF 7
            LD  D+++L +LVF +   FSRF
Sbjct: 1508 LDAIDLYYLAALVFGTRPFFSRF 1530


>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
            protein H05L14.2 protein.
          Length = 2162

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 75   LDVSDIFFLISLVFVSETIFSRF 7
            LD  D+++L +LVF +   FSRF
Sbjct: 1508 LDAIDLYYLAALVFGTRPFFSRF 1530


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 321  GECFLLQYSSEITIRCYRAYNG 256
            GEC   Q SS+ T +C+  ++G
Sbjct: 1084 GECVASQNSSDFTCKCHEGFSG 1105


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 321  GECFLLQYSSEITIRCYRAYNG 256
            GEC   Q SS+ T +C+  ++G
Sbjct: 1084 GECVASQNSSDFTCKCHEGFSG 1105


>AF003146-6|ABS83849.1|  233|Caenorhabditis elegans Skn-1 dependent
           zygotic transcriptprotein 22 protein.
          Length = 233

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 365 LLISFNINIKTI*LMVSAFYYNIQVK*Q 282
           LLISF++ +KTI L+V    +N   K Q
Sbjct: 7   LLISFSVTMKTIILIVLVIIWNTNAKEQ 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,244,749
Number of Sequences: 27780
Number of extensions: 206790
Number of successful extensions: 557
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)