Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d06
         (679 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1169 + 24501594-24502826                                         32   0.49 
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553...    29   2.6  
04_04_0702 + 27383876-27384862                                         29   2.6  
03_04_0184 - 18210875-18212065                                         29   3.4  
03_02_0667 - 10284554-10284735,10284949-10285141,10285226-102853...    29   4.5  

>07_03_1169 + 24501594-24502826
          Length = 410

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 149 FAIMKDEWERNDAVDVSNGVSWSWEQYWSTVLHQYGV 259
           +A + D   +N+A + SNG  + W+Q W  +  ++GV
Sbjct: 280 WAAVADAAAKNEAFNCSNGDIYKWKQLWPVLAGKFGV 316


>06_03_0253 +
           18753901-18754278,18754873-18754968,18755167-18755376,
           18756028-18756093,18756379-18756576,18756616-18756810,
           18756968-18757014,18757147-18757234,18757331-18757681,
           18758593-18759123
          Length = 719

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 134 CKLLCFAIMKDEWERNDAVDVSNGVSWSWEQYW 232
           CK+L F +    ++R DA D  +  SWS +  W
Sbjct: 310 CKVLYFIVQTPSYKRFDATDSRDWHSWSAQTNW 342


>04_04_0702 + 27383876-27384862
          Length = 328

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 209 SWSWEQYWSTVL 244
           SWSWEQYW  +L
Sbjct: 294 SWSWEQYWEALL 305


>03_04_0184 - 18210875-18212065
          Length = 396

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 164 DEWERNDAVDVSNGVSWSWEQYWSTVLHQYGV 259
           + + +N+A + SNG  + W+  W  +  Q+GV
Sbjct: 271 EPFAKNEAFNCSNGDLYKWKLLWPMLADQFGV 302


>03_02_0667 -
           10284554-10284735,10284949-10285141,10285226-10285307,
           10286537-10286751
          Length = 223

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 355 GNLHVHAGEEYIFDIAGKNKTKAKXXXXXXXXXXXXEYKIV 477
           G+L    G+E+++D++G+  T AK            EY++V
Sbjct: 65  GSLQYKKGKEHVYDVSGQTPTCAKVALEHYNRSYEDEYEMV 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,041,984
Number of Sequences: 37544
Number of extensions: 350070
Number of successful extensions: 850
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)