Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29d05
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450 pr...    30   0.079
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   0.97 
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    26   1.3  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    26   1.3  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   1.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   3.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   3.0  

>AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 29.9 bits (64), Expect = 0.079
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 441 AIAMNSLCPSGSRHADNADTNLRLFSIEFLTLVFN 337
           A+ +++L PSG  H   ADT L  F I   TL+ N
Sbjct: 16  ALRIDTLVPSGIPHVATADTELAGFQIPKGTLIIN 50


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 586 IRRKTLARSSHACAPTINLTYIETLLYY 669
           +RRKTL  + +   P + ++Y+  L++Y
Sbjct: 248 LRRKTLFYTVNLIIPCVGISYLSVLVFY 275


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 468 AQDTSSITLAIAMNSLCPSGSRHADNADTNLRLFSIEFLTLV 343
           A   +++  A+ +++L PSG  H    DT LR + +   TLV
Sbjct: 52  AYTEATLREAMRIDTLVPSGIAHRVQEDTTLRGYDLPKDTLV 93


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 564 WESFSPMTSSTLYGGVIITWCILLLYTRMLCPAQ 463
           W +F  +T   + GGV++T  +   Y R    AQ
Sbjct: 576 WRAFVYITKPAIIGGVLLTMGVATYYLRAKSRAQ 609


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 413 EGQRLFMAIARVIDDVSWAGQSIRVY 490
           +G+RL+  IA + DDVS     +R+Y
Sbjct: 157 KGRRLWFGIANIEDDVSVLMAELRLY 182


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 586 IRRKTLARSSHACAPTINLTYIETLLYY 669
           IRRKTL  + +   PT+ ++++  L++Y
Sbjct: 228 IRRKTLFYTVNLILPTVLISFLCVLVFY 255


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +1

Query: 586 IRRKTLARSSHACAPTINLTYIETLLYY 669
           +RRKTL  + +   P + ++++  L++Y
Sbjct: 235 LRRKTLFYTVNLIIPCVGISFLSVLVFY 262


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = +1

Query: 91  RFGLLHDRQYSRHAH--LLQRKHRRRGPSFRSSNKNVDSEMPIVQRQSETARRQHREPVP 264
           R   L + + +R A    ++R+  R     R   +    +    QR+ E   RQ RE   
Sbjct: 448 RAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQ 507

Query: 265 RQRRSNQE 288
           R+R   ++
Sbjct: 508 REREQREK 515


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 112  RQYSRHAHLLQRKHRRRG--PSFRSSNKNVDSEMPIVQRQSETARRQHREPVPRQRRSNQ 285
            R  +R    ++++  + G  PS  SS+         ++ +    R++HR+    +RR  +
Sbjct: 1054 RNVARRTQTVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERRGVE 1113

Query: 286  EGSI 297
             G I
Sbjct: 1114 GGDI 1117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,506
Number of Sequences: 2352
Number of extensions: 16153
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)