Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29d05
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73428-5|CAA97808.2| 209|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 33 0.14
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 30 1.3
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 30 1.3
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 30 1.3
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 2.4
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 29 4.1
U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome reg... 29 4.1
U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome reg... 29 4.1
AC006676-4|AAK71380.1| 288|Caenorhabditis elegans Hypothetical ... 29 4.1
Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical pr... 28 5.4
AC024202-10|AAF36032.1| 327|Caenorhabditis elegans Hypothetical... 28 5.4
U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical p... 28 7.2
U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical pr... 28 7.2
>Z73428-5|CAA97808.2| 209|Caenorhabditis elegans Hypothetical
protein M142.5 protein.
Length = 209
Score = 44.8 bits (101), Expect = 6e-05
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Frame = +2
Query: 110 IGSIVATRTCYNENIEGEVLAFDPQTKMLILKCQSSSGNPKR----HDVNIVNLSLVSDV 277
IG+ V T + G V++FD K+L+L + + N + ++ N+ ++S+
Sbjct: 13 IGACVEIETTNGLSARGVVISFDTTRKVLVLDTKEMAINKPMIRIFNSEHLKNIKVLSEA 72
Query: 278 QIKKEVSTVPEPPQSLNLHRLN-TRVRNSIENKR-RLVSAL--SACLDPEGQRLFMAIAR 445
+ E + Q + +N TR ++ L L S + GQ+ ++ + R
Sbjct: 73 LEESEKFARAKTEQFAQNNPVNGTRTTERLDKTLGELTPNLMKSPAISIRGQQAYLQLKR 132
Query: 446 VIDDVSWAGQSIRVYNNKIHQVMITPPYKVDDVIGEKDSQSYN 574
I D W G+ IRV + V++ PY+V DV + + ++
Sbjct: 133 TIPDTCWCGEDIRV----LGLVLVHKPYEVSDVTKDAKATGFD 171
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +1
Query: 145 RKHRRRGPSFRSSNKNVDSEMPIVQRQSETARRQHREPVPRQRRSNQ 285
+K +RRG +N S+ Q+Q++ AR+QH + + +Q++SNQ
Sbjct: 7 KKPQRRGNQSGQQQQNQPSQQNNQQQQNQGARQQHPQQMQQQQQSNQ 53
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 139 LQRKHRRRGPSFRSSNKNVDSEMPIVQRQSETARRQHREPVPRQRRSNQ 285
+ + +RRG +N S+ Q+Q++ AR+QH + + +Q++SNQ
Sbjct: 129 MMQHQQRRGNQSGQQQQNQPSQQNNQQQQNQGARQQHPQQMQQQQQSNQ 177
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 305 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 430
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 85 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 126
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 305 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 430
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 102 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 143
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 305 PEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLDPEGQRLF 430
P+ PQ L+ H + +N I + SA S+C P+G F
Sbjct: 214 PQQPQLLHHHNNHLGYQNGIHQITSINSAASSCSSPDGDSAF 255
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +1
Query: 112 RQYSRHAHLLQRKHRRRGPSFRSSNKNVDSEMPIVQRQSETARRQHREPVPRQRRSNQ 285
R R R+ RRR P + E V+R+S RRQ R P +R+S Q
Sbjct: 273 RSVERQDQREDRRDRRRSPEDPRERRR-SPEDRTVRRRSPERRRQQRSPSVERRKSPQ 329
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +1
Query: 40 IIQLKQKRLSTRKHVGRRFGLLHDRQYSRHAHLLQRKHRRRGPSFRSSNKNVDSEMPIVQ 219
I+Q +KR K V +R H R + RHA + R G + S++K E +
Sbjct: 574 IVQTIRKRRMIEKEVRKRRTRRHRRLHKRHAMM-----SRYGMTSGSASKYDKVEKTQKE 628
Query: 220 RQSETARRQHREPVPRQRRSNQEGSIHGTRA 312
Q R+HR+ P + G +A
Sbjct: 629 LQDIADAREHRKDAPAPKSVKLHGKKKAMKA 659
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +1
Query: 40 IIQLKQKRLSTRKHVGRRFGLLHDRQYSRHAHLLQRKHRRRGPSFRSSNKNVDSEMPIVQ 219
I+Q +KR K V +R H R + RHA + R G + S++K E +
Sbjct: 572 IVQTIRKRRMIEKEVRKRRTRRHRRLHKRHAMM-----SRYGMTSGSASKYDKVEKTQKE 626
Query: 220 RQSETARRQHREPVPRQRRSNQEGSIHGTRA 312
Q R+HR+ P + G +A
Sbjct: 627 LQDIADAREHRKDAPAPKSVKLHGKKKAMKA 657
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +1
Query: 40 IIQLKQKRLSTRKHVGRRFGLLHDRQYSRHAHLLQRKHRRRGPSFRSSNKNVDSEMPIVQ 219
I+Q +KR K V +R H R + RHA + R G + S++K E +
Sbjct: 574 IVQTIRKRRMIEKEVRKRRTRRHRRLHKRHAMM-----SRYGMTSGSASKYDKVEKTQKE 628
Query: 220 RQSETARRQHREPVPRQRRSNQEGSIHGTRA 312
Q R+HR+ P + G +A
Sbjct: 629 LQDIADAREHRKDAPAPKSVKLHGKKKAMKA 659
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +1
Query: 40 IIQLKQKRLSTRKHVGRRFGLLHDRQYSRHAHLLQRKHRRRGPSFRSSNKNVDSEMPIVQ 219
I+Q +KR K V +R H R + RHA + R G + S++K E +
Sbjct: 572 IVQTIRKRRMIEKEVRKRRTRRHRRLHKRHAMM-----SRYGMTSGSASKYDKVEKTQKE 626
Query: 220 RQSETARRQHREPVPRQRRSNQEGSIHGTRA 312
Q R+HR+ P + G +A
Sbjct: 627 LQDIADAREHRKDAPAPKSVKLHGKKKAMKA 657
>U13876-16|AAW88394.1| 420|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform b
protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +2
Query: 224 NPKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENKRRLVSALSAC 403
N RH N+V D IKK+ ++ E L ++ +RN IE R + +L
Sbjct: 20 NVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRNMIEQTRPFLVSLGKA 79
Query: 404 LDPEGQRLFMAIARVIDD 457
+ R + + IDD
Sbjct: 80 KAAKLVRDLVDLCLKIDD 97
>U13876-15|AAA21173.2| 438|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 6, isoform a
protein.
Length = 438
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +2
Query: 224 NPKRHDVNIVNLSLVSDVQIKKEVSTVPEPPQSLNLHRLNTRVRNSIENKRRLVSALSAC 403
N RH N+V D IKK+ ++ E L ++ +RN IE R + +L
Sbjct: 38 NVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRNMIEQTRPFLVSLGKA 97
Query: 404 LDPEGQRLFMAIARVIDD 457
+ R + + IDD
Sbjct: 98 KAAKLVRDLVDLCLKIDD 115
>AC006676-4|AAK71380.1| 288|Caenorhabditis elegans Hypothetical
protein M04F3.1 protein.
Length = 288
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 196 DSEMPIVQRQSETARRQHREPVPRQRRSNQEGSIHGTRAPPIIELAQIEHKS 351
D + I + ++E AR ++ V + +S G APP ++Q H+S
Sbjct: 148 DKDFTIFELEAEAARLFFQKNVSEKLKSVDSDGFQGMLAPPKSRMSQTSHQS 199
>Z92790-4|CAB07227.2| 227|Caenorhabditis elegans Hypothetical
protein H03G16.5 protein.
Length = 227
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 287 KEVST--VPEPPQSLNLHRLNTRVRNSIENKRRLVSALSACLD 409
KE+S V + ++NL RL TRV I+NK L+ A L+
Sbjct: 65 KEISKKKVFKMDDTMNLLRLGTRVHLIIQNKEELIDKYKAMLE 107
>AC024202-10|AAF36032.1| 327|Caenorhabditis elegans Hypothetical
protein Y71H2B.3 protein.
Length = 327
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 193 VDSEMPIVQRQSETARRQHREPVP 264
+D E+P+++ +E A HR P P
Sbjct: 204 IDDELPLLKMMAERASHPHRHPAP 227
>U21323-10|AAW30670.1| 805|Caenorhabditis elegans Hypothetical
protein C45G9.10b protein.
Length = 805
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 21 HQNITIHYSIETKTFINP*TCRPSF 95
+QN +HY I ++TF P T P++
Sbjct: 609 NQNFRVHYQIGSRTFERPQTTSPTY 633
>U21323-9|AAA62553.1| 971|Caenorhabditis elegans Hypothetical
protein C45G9.10a protein.
Length = 971
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 21 HQNITIHYSIETKTFINP*TCRPSF 95
+QN +HY I ++TF P T P++
Sbjct: 775 NQNFRVHYQIGSRTFERPQTTSPTY 799
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,583,487
Number of Sequences: 27780
Number of extensions: 364819
Number of successful extensions: 1189
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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