Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29c24
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical ... 29 2.5
Z83125-5|CAB05622.2| 362|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z75713-5|CAB00054.1| 598|Caenorhabditis elegans Hypothetical pr... 28 5.7
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 28 5.7
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbona... 28 5.7
U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbona... 28 5.7
AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transpo... 28 5.7
AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transpo... 28 5.7
AF000198-3|AAT81147.1| 125|Caenorhabditis elegans Hypothetical ... 28 5.7
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 28 5.7
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p... 28 7.5
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 7.5
U97007-2|AAB52298.2| 271|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 27 9.9
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 9.9
U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical p... 27 9.9
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 27 9.9
>AF024502-3|AAB70373.1| 836|Caenorhabditis elegans Hypothetical
protein M151.3 protein.
Length = 836
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 FELKQLLFQTGLNGRHNEDLNIVSKVLSLNHGIPLNNVSN-RLPFDSRRQVNT 403
FE+K+L + + NE+L ++ L HG+ ++N+S +L + +++NT
Sbjct: 400 FEIKKLNDEISGLRQENEELRASNEYLRTAHGVDVHNISQLQLQIKATQELNT 452
>Z83125-5|CAB05622.2| 362|Caenorhabditis elegans Hypothetical
protein T15D6.6 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +2
Query: 314 VSKVLSLNHGIPLNNVSNRLPFDSRRQVNTFI*TKRFIALERKLDIL*SS*KIPFPISCK 493
VSK+L ++HG L ++ D R +NT ++E L+I K+ + CK
Sbjct: 150 VSKILKISHGSLLKYYIYQITHDKRNNMNTL----NIKSVEEFLEITSVQNKLAAEL-CK 204
Query: 494 ICLSPQLINN 523
C L++N
Sbjct: 205 TCPGVDLLDN 214
>Z75713-5|CAB00054.1| 598|Caenorhabditis elegans Hypothetical
protein T01G9.4 protein.
Length = 598
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 405 NVFTCLLLSKGKRFETLFNGMPWFRDRTLDTIFKSSL 295
+VF CL+ F+ L PW +D I KS+L
Sbjct: 305 DVFWCLISKDDINFQQLIASNPWLAVHLVDLIHKSTL 341
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 17 TFLQPSPTQSFHQGLNLNQISTNQQVPKQNTRV 115
T L P Q H NQ++ Q +P QNT++
Sbjct: 683 TLLAPKSAQMTHIAPTYNQLAQQQGIPMQNTQM 715
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 17 TFLQPSPTQSFHQGLNLNQISTNQQVPKQNTRV 115
T L P Q H NQ++ Q +P QNT++
Sbjct: 683 TLLAPKSAQMTHIAPTYNQLAQQQGIPMQNTQM 715
>U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform b protein.
Length = 883
Score = 28.3 bits (60), Expect = 5.7
Identities = 7/28 (25%), Positives = 19/28 (67%)
Frame = -1
Query: 527 LHYLLTVGLNIFCRILGTVFFKKIIKYL 444
+HY+ +IFC ++ +FF ++++++
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFI 578
>U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform a protein.
Length = 956
Score = 28.3 bits (60), Expect = 5.7
Identities = 7/28 (25%), Positives = 19/28 (67%)
Frame = -1
Query: 527 LHYLLTVGLNIFCRILGTVFFKKIIKYL 444
+HY+ +IFC ++ +FF ++++++
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFI 578
>AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion
transporter ABTS-4b protein.
Length = 936
Score = 28.3 bits (60), Expect = 5.7
Identities = 7/28 (25%), Positives = 19/28 (67%)
Frame = -1
Query: 527 LHYLLTVGLNIFCRILGTVFFKKIIKYL 444
+HY+ +IFC ++ +FF ++++++
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFI 578
>AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion
transporter ABTS-4a protein.
Length = 956
Score = 28.3 bits (60), Expect = 5.7
Identities = 7/28 (25%), Positives = 19/28 (67%)
Frame = -1
Query: 527 LHYLLTVGLNIFCRILGTVFFKKIIKYL 444
+HY+ +IFC ++ +FF ++++++
Sbjct: 551 IHYVTIYTEDIFCALISLIFFSEVVEFI 578
>AF000198-3|AAT81147.1| 125|Caenorhabditis elegans Hypothetical
protein T28F2.4b protein.
Length = 125
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 50 HQGLNLNQISTNQQVPKQNTRVFRQEVGV 136
H GLN++++ ++ VPKQN R+ V V
Sbjct: 61 HDGLNIDRVLSHGPVPKQNGGTKRKHVEV 89
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 50 HQGLNLNQISTNQQVPKQNTRVFRQEVGV 136
H GLN++++ ++ VPKQN R+ V V
Sbjct: 61 HDGLNIDRVLSHGPVPKQNGGTKRKHVEV 89
>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 468 FQEDYKISNFLSKA-INLLV*INVFTCLLLSKGKRFETLFNGMPW 337
F E YKI F++ A I L+V I + CL + GKR E W
Sbjct: 489 FWEQYKILIFVAIAVIVLMVLIMIIGCLCVISGKRAERARINAEW 533
>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
protein AH6.1 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 468 FQEDYKISNFLSKA-INLLV*INVFTCLLLSKGKRFETLFNGMPW 337
F E YKI F++ A I L+V I + CL + GKR E W
Sbjct: 489 FWEQYKILIFVAIAVIVLMVLIMIIGCLCVISGKRAERARINAEW 533
>U97007-2|AAB52298.2| 271|Caenorhabditis elegans Hypothetical
protein ZC196.8 protein.
Length = 271
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 592 YYFFSRFLYFCNYVIGSLLFFGCIIY*LWA*TYFAGYWERYF 467
+YFFS + FC+Y S+LF +I A +F W F
Sbjct: 43 FYFFSYLIDFCHY---SILFSNLVISIQRAFVFFLRNWTNQF 81
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 127 GRCWQLRNQQSKLQSLQHF*SCSHEQIFPAAIENQ 231
G+ Q++ QQ + Q +QH H+Q+ + NQ
Sbjct: 339 GQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQ 373
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 127 GRCWQLRNQQSKLQSLQHF*SCSHEQIFPAAIENQ 231
G+ Q++ QQ + Q +QH H+Q+ + NQ
Sbjct: 399 GQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQ 433
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 127 GRCWQLRNQQSKLQSLQHF*SCSHEQIFPAAIENQ 231
G+ Q++ QQ + Q +QH H+Q+ + NQ
Sbjct: 402 GQLHQIQQQQQQCQQIQHQPPQQHQQVINGQVMNQ 436
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 250 KIWCKLIGSRLLREK 206
++WC LIGS L+R K
Sbjct: 648 RVWCHLIGSELIRNK 662
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
protein C02B4.1 protein.
Length = 1461
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 250 KIWCKLIGSRLLREK 206
++WC LIGS L+R K
Sbjct: 648 RVWCHLIGSELIRNK 662
>U80843-11|AAB37970.1| 296|Caenorhabditis elegans Hypothetical
protein C32B5.15 protein.
Length = 296
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 418 KIYCFGEKIRYFIIFLKNTVPNILQNMFKPTVNK*CNQRKAEIRLHNYKNIK 573
K Y G ++ L+NT+ N+ Q K + Q ++ ++H++ NI+
Sbjct: 127 KFYFNGSTLKVVHEMLRNTILNLHQTHLKSNIIFFWKQGMSQQKIHHFSNIR 178
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 250 KIWCKLIGSRLLREK 206
++WC LIGS L+R K
Sbjct: 648 RVWCHLIGSELIRNK 662
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,391,879
Number of Sequences: 27780
Number of extensions: 320490
Number of successful extensions: 746
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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