Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29c24
         (707 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   5.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.6  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 215 QQSRTNQFTPDFELKQLLFQTGLNGRH 295
           Q SR  +F     L+QL  QTGL+G H
Sbjct: 113 QLSREQRFLRR-RLEQLTNQTGLHGLH 138


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 646 TIIAIKIIENPIGKYDRTYY 587
           TI   K++E+P GKY+ + Y
Sbjct: 37  TIELDKVLESPRGKYEFSKY 56


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 661 KYVFNTIIAIKIIENPIGKYDRTYYFFSRFL 569
           K +F +   I +IE  I K  + +  F+RFL
Sbjct: 159 KRIFTSSQNIAVIEYRIPKSGKGFSLFARFL 189


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,562
Number of Sequences: 438
Number of extensions: 4569
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)