Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29c12
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-7|CAA82659.1| 88|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z75956-4|CAN99718.1| 252|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z75956-3|CAJ90494.1| 217|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical p... 30 1.4
Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical pr... 30 1.4
U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein. 30 1.4
U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protei... 30 1.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.4
U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF003130-18|AAO38640.1| 441|Caenorhabditis elegans Prion-like-(... 29 2.4
AF003130-17|AAB54127.1| 470|Caenorhabditis elegans Prion-like-(... 29 2.4
AF003130-16|AAK68879.1| 457|Caenorhabditis elegans Prion-like-(... 29 2.4
AF003130-15|AAM45365.1| 465|Caenorhabditis elegans Prion-like-(... 29 2.4
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF025461-2|ABC71819.1| 670|Caenorhabditis elegans Hypothetical ... 29 4.3
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 28 7.4
U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 28 7.4
Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z29560-7|CAA82659.1| 88|Caenorhabditis elegans Hypothetical
protein K03H1.7 protein.
Length = 88
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 188 DPRSPTQDFERTPIIISSKINDLTNDTEN 274
DPRSP+QD ERTPI + + ND +E+
Sbjct: 30 DPRSPSQDIERTPIQVKTVENDENGSSES 58
>Z75956-2|CAJ90493.2| 384|Caenorhabditis elegans Hypothetical
protein R31.2b protein.
Length = 384
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Frame = +2
Query: 215 ERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYM--------EAKEFSP 370
++ +I + NDL + + D + K+ D + E +E SP
Sbjct: 117 KKVDMIFTLPENDLVESIDQIHRFKDCQKIDVIFKENDRESTPMVTGDAVNMSEEREVSP 176
Query: 371 -DLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENKPTKLLETNFDCN 547
DL+ KN +D ND ++ EEP + A E L + P L T+ D N
Sbjct: 177 KDLVVEKNYGQEDIDIPKNDDHEEQEEPRAPTPA--EDLSHYVKEPSPPVSLAATDLDSN 234
Query: 548 EVCD 559
D
Sbjct: 235 NGAD 238
>Z75956-1|CAB00128.2| 489|Caenorhabditis elegans Hypothetical
protein R31.2a protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.15
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Frame = +2
Query: 215 ERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYM--------EAKEFSP 370
++ +I + NDL + + D + K+ D + E +E SP
Sbjct: 222 KKVDMIFTLPENDLVESIDQIHRFKDCQKIDVIFKENDRESTPMVTGDAVNMSEEREVSP 281
Query: 371 -DLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENKPTKLLETNFDCN 547
DL+ KN +D ND ++ EEP + A E L + P L T+ D N
Sbjct: 282 KDLVVEKNYGQEDIDIPKNDDHEEQEEPRAPTPA--EDLSHYVKEPSPPVSLAATDLDSN 339
Query: 548 EVCD 559
D
Sbjct: 340 NGAD 343
>Z75956-4|CAN99718.1| 252|Caenorhabditis elegans Hypothetical
protein R31.2d protein.
Length = 252
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +2
Query: 308 ITSKDKDNSCETYMEAKEFSP-DLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETL 484
I K E +E SP DL+ KN +D ND ++ EEP + A E L
Sbjct: 24 INRTPKTGDAVNMSEEREVSPKDLVVEKNYGQEDIDIPKNDDHEEQEEPRAPTPA--EDL 81
Query: 485 EANKSNENKPTKLLETNFDCNEVCD 559
+ P L T+ D N D
Sbjct: 82 SHYVKEPSPPVSLAATDLDSNNGAD 106
>Z75956-3|CAJ90494.1| 217|Caenorhabditis elegans Hypothetical
protein R31.2c protein.
Length = 217
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 350 EAKEFSP-DLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENKPTKLL 526
E +E SP DL+ KN +D ND ++ EEP + A E L + P L
Sbjct: 3 EEREVSPKDLVVEKNYGQEDIDIPKNDDHEEQEEPRAPTPA--EDLSHYVKEPSPPVSLA 60
Query: 527 ETNFDCNEVCD 559
T+ D N D
Sbjct: 61 ATDLDSNNGAD 71
>Z72512-4|CAA96666.1| 328|Caenorhabditis elegans Hypothetical
protein R07B5.6 protein.
Length = 328
Score = 31.1 bits (67), Expect = 0.80
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = -2
Query: 678 EGERGSYSKILNTGIHCSLLSLTSVESGFDMLFLLLLNSISQTSLQSKLVSNSL 517
+G R SY ++ + + CSL L SV F + + NS ++T QSK +SL
Sbjct: 194 DGWRNSYIHLVMSIVMCSLTILCSVVMLFKLRQSVFSNSSARTKEQSKRAESSL 247
>Z81491-17|CAO82030.1| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = +2
Query: 110 STNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLIS 289
S NG+ + + ++ +KN+ S SP + TP +SKIND+T+ ++ L +S
Sbjct: 388 SPNGESMFVWSKFPVNKQVKNYRPS-GKSSPFLCSKTTP---NSKINDVTSLSDILNSVS 443
Query: 290 DSCTSPITSKDKDNSCETYME 352
++ S + + +DN+ + E
Sbjct: 444 ETPISLLNTLYRDNAYPRFPE 464
>Z81092-2|CAB03145.3| 959|Caenorhabditis elegans Hypothetical
protein F58D12.3 protein.
Length = 959
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = +2
Query: 110 STNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTNDTENLRLIS 289
S NG+ + + ++ +KN+ S SP + TP +SKIND+T+ ++ L +S
Sbjct: 388 SPNGESMFVWSKFPVNKQVKNYRPS-GKSSPFLCSKTTP---NSKINDVTSLSDILNSVS 443
Query: 290 DSCTSPITSKDKDNSCETYME 352
++ S + + +DN+ + E
Sbjct: 444 ETPISLLNTLYRDNAYPRFPE 464
>U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein.
Length = 293
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 431 LQDNEEPLGSSTASKETLEANKSNENKPTKLLETNFDCNEVCDIEFNSKRNSMSNPDSTE 610
LQDN+EP S S+ S E++ K + D E D + + + M D TE
Sbjct: 141 LQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDQQEML--DKTE 198
Query: 611 VNDSRE 628
+ +++E
Sbjct: 199 LQETQE 204
>U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protein
17 protein.
Length = 277
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 431 LQDNEEPLGSSTASKETLEANKSNENKPTKLLETNFDCNEVCDIEFNSKRNSMSNPDSTE 610
LQDN+EP S S+ S E++ K + D E D + + M D TE
Sbjct: 141 LQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDHKEML--DKTE 198
Query: 611 VNDSRE 628
+ +++E
Sbjct: 199 LQETQE 204
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 2.4
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Frame = +2
Query: 197 SPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDL 376
S + E T +S + T+ T + S + TS +S S T E + L
Sbjct: 315 STSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPT-TTTPEITSTL 373
Query: 377 IS-PKNLCNGFLD-----STFNDTLQDN---EEPLGSSTASKETLEANKSNENKPTKLLE 529
S P N +LD +TF T+ + EEP S+T ++ T ++ +PT L
Sbjct: 374 SSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLT 433
Query: 530 TN 535
T+
Sbjct: 434 TS 435
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.5 bits (63), Expect = 2.4
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Frame = +2
Query: 197 SPTQDFERTPIIISSKINDLTNDTENLRLISDSCTSPITSKDKDNSCETYMEAKEFSPDL 376
S + E T +S + T+ T + S + TS +S S T E + L
Sbjct: 315 STSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPT-TTTPEITSTL 373
Query: 377 IS-PKNLCNGFLD-----STFNDTLQDN---EEPLGSSTASKETLEANKSNENKPTKLLE 529
S P N +LD +TF T+ + EEP S+T ++ T ++ +PT L
Sbjct: 374 SSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLT 433
Query: 530 TN 535
T+
Sbjct: 434 TS 435
>U88176-4|ABB51191.1| 427|Caenorhabditis elegans Hypothetical
protein F18F11.3 protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 548 EVCDIEFNSKRNSMSNPDSTEVNDSREQCMPVFKILEYDPRSPSIGIER 694
++ D+ NS + S + P S E++++ E +FK+ DP + GI R
Sbjct: 123 QIVDVNDNSPQFS-NTPSSFEISENAEIGTDIFKVTTLDPDTGISGISR 170
>AF003130-18|AAO38640.1| 441|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform d protein.
Length = 441
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 338 ETYMEAKEFS--PDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENK 511
E YM ++ F PDLIS +N +LDS F + SS+ S EA+ S
Sbjct: 299 ERYMCSRFFIDFPDLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATT 358
Query: 512 PTKLL 526
+ L+
Sbjct: 359 SSLLV 363
>AF003130-17|AAB54127.1| 470|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform a protein.
Length = 470
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 338 ETYMEAKEFS--PDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENK 511
E YM ++ F PDLIS +N +LDS F + SS+ S EA+ S
Sbjct: 328 ERYMCSRFFIDFPDLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATT 387
Query: 512 PTKLL 526
+ L+
Sbjct: 388 SSLLV 392
>AF003130-16|AAK68879.1| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform b protein.
Length = 457
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 338 ETYMEAKEFS--PDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENK 511
E YM ++ F PDLIS +N +LDS F + SS+ S EA+ S
Sbjct: 315 ERYMCSRFFIDFPDLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATT 374
Query: 512 PTKLL 526
+ L+
Sbjct: 375 SSLLV 379
>AF003130-15|AAM45365.1| 465|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform c protein.
Length = 465
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 338 ETYMEAKEFS--PDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNENK 511
E YM ++ F PDLIS +N +LDS F + SS+ S EA+ S
Sbjct: 323 ERYMCSRFFIDFPDLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATT 382
Query: 512 PTKLL 526
+ L+
Sbjct: 383 SSLLV 387
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 429 VSLKVESKNPLHKFFGEIK 373
+S+ + +K PLHKF GEIK
Sbjct: 210 ISVPIYAKKPLHKFGGEIK 228
>AF025461-2|ABC71819.1| 670|Caenorhabditis elegans Hypothetical
protein M01D1.2b protein.
Length = 670
Score = 28.7 bits (61), Expect = 4.3
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 164 IKNHLQSYDPRSPTQDFERTPIIISSKIND-LTNDTENLRLISD-SCTSPITSKDKDNSC 337
+KN L+S + D ++P I +N L + TE LI+ C +TSK K ++
Sbjct: 556 VKNALKS--KQQLKNDTLKSPAITDENVNTKLRSATEQEDLITIYQCEEFLTSKSKKSTS 613
Query: 338 ETYMEAKEFSPDLISPKNLC 397
E A EF+ D + KN C
Sbjct: 614 EMLRIAMEFNLDNL--KNHC 631
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -1
Query: 118 VCRFKRLSEVYIFCYVMFSAIFSYIYMVCTFV 23
+C FK S ++FC++ F +++ C+F+
Sbjct: 15 MCAFKTPSH-FLFCFLPLILFFKMVFLFCSFI 45
>U50069-7|AAB37561.1| 913|Caenorhabditis elegans Hypothetical
protein C09B9.7 protein.
Length = 913
Score = 27.9 bits (59), Expect = 7.4
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Frame = +2
Query: 362 FSPDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETL-EANKSNENKPTKLLETNF 538
F ++S K+L D L +EE L S T+ + L +A+ E KL+
Sbjct: 244 FFRGILSSKHLERESRDPWLGKVLNVSEEHLASITSGLQPLIKASDHLETVNDKLMSVRP 303
Query: 539 DCNEVCDIEFNSKRNSMSN--PDSTEVN----DSREQCMPVFKILEYDPRSPSIGI 688
+ F S +MS+ P S +V D QC + +L YD R P + +
Sbjct: 304 NALSRSLGYFQSFVTTMSSYSPMSKDVEHYLVDFLLQCEHIHPVLRYDHREPGVNL 359
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 27.9 bits (59), Expect = 7.4
Identities = 27/159 (16%), Positives = 65/159 (40%), Gaps = 5/159 (3%)
Frame = +2
Query: 80 KNIDLRKTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLT 259
+NI+ +K +++ P+ +K ++ DP P + I ++ N +
Sbjct: 521 ENIEPKKKESKEKKNKREKKEKPVKEKAVKKGKKTKDPNEPKRATTAYIIWFNANRNSMK 580
Query: 260 NDTENLRLISDSCTSPITSKDKDNSCETYMEAKE----FSPDLISPKNLCNGFLDSTFND 427
D + L ++ + S D+ E +A + + ++ K G ++
Sbjct: 581 EDGDTLGDVAKKAGAKWKSMSADDKKEWNDKAAQDKARYEAEMKEYKKNGGGVEKASGPS 640
Query: 428 TLQDNEEPLGSSTASKETL-EANKSNENKPTKLLETNFD 541
T + +++ G SKE + + + S++++P K + D
Sbjct: 641 TKKSSDQSPGKQFKSKEHISDTDDSDDDEPLKAKKDESD 679
>Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical
protein K09E4.2 protein.
Length = 640
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 329 NSCETYMEAKEFSPDLISPKNLCNGFLDSTFNDTLQDNEEPLGSSTASKETLEANKSNEN 508
N ET K F + KNL +L QD+EE SS + + + N E
Sbjct: 550 NPNETPTTWKSFKFPKNADKNLLESYLKLHGAGAQQDSEESEISSAEEEASDDENSGEEE 609
Query: 509 KPTKLLETNFDCNEVCDIEFN 571
T+ +E N E + E N
Sbjct: 610 PNTEKIEQNSCKAEASEQESN 630
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,766,040
Number of Sequences: 27780
Number of extensions: 340168
Number of successful extensions: 1255
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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