Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte29c10
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 107 6e-24
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 31 0.90
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 30 1.6
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 30 2.1
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 29 2.7
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 29 2.7
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 29 2.7
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 28 8.4
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 28 8.4
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 28 8.4
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 28 8.4
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 28 8.4
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 107 bits (258), Expect = 6e-24
Identities = 51/174 (29%), Positives = 105/174 (60%)
Frame = +2
Query: 173 LAHLNSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERM 352
L ++ + +L +L+DDA ES++ ++ QV+ T+KE +A+N+SLAE+NL ++P ++
Sbjct: 22 LRNMTNEQLISLLDDDALLESIIVNLPQVRSMPTDKESALAANKSLAEWNLAQKPRIDAA 81
Query: 353 KAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFL 532
K + + + ++L + L + S+ S DTT +L+Q AA E+++ ++ + F
Sbjct: 82 KTQTVDLYDQVKKLQGEVAVLKSQLDSVSSSKSLDTTSSLMQVAAQEADDDAEALFTQFE 141
Query: 533 SGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAYGNGATKPYLPYS 694
+G++ V+ FL+ F+ + H+RK K+++++ LLR ++Y P +P++
Sbjct: 142 NGEISVEIFLKQFKDKKTIAHLRKIKSDRLAALLREQTYSSYAQPTVPPPMPHA 195
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 33.1 bits (72), Expect = 0.22
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Frame = +2
Query: 203 EMLNDDAKFESVLKDVKQVKD-WD------------TEKEMFIASNRSLAEFNLGK-EPE 340
E+ D + VLK+VKQ+ D D E++ F+ + + E + + + +
Sbjct: 219 EVHQDQENTQKVLKEVKQLSDRLDYLTPKRKDVSRIKERDDFLQFSAKIIEETMSELKLK 278
Query: 341 LERMKAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIA 520
R++ EL EK EL + +QE L T++ G S T L + Q +I
Sbjct: 279 NARLERELSEKEELVKVTKEELQE-LQKTVTQAMGDSEQAT-KYLHAENMKLTRQKADIR 336
Query: 521 RDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELLRN 640
D L + + F E E + KQ +++EL +N
Sbjct: 337 CDLLEARRNLKGFDEKREELEKQRDEALEDVRRITELKKN 376
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.1 bits (72), Expect = 0.22
Identities = 30/139 (21%), Positives = 66/139 (47%)
Frame = +2
Query: 200 KEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSE 379
K++ + E++ KD + ++ T E +S +++E E + ++A +EKSE
Sbjct: 257 KQLEEAQSSIENLKKDAENERNLKTALESDESS--AISEITKQMEAAKKELEASEKEKSE 314
Query: 380 LGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKF 559
L EQ+ R+Q++ + I L+ A + + +AR+ L+G++ +
Sbjct: 315 LREQM-DRLQKV---HNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGEL--ENA 368
Query: 560 LEDFEPIRKQMHIRKYKAE 616
ED + + ++ H +A+
Sbjct: 369 KEDLKVVEEEKHTGIQRAQ 387
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +2
Query: 197 LKEML-NDDAKFESV-LKDVKQVKD---WDTEKEMFIASNRSLAEFNLGKEPELERMKAE 361
L+E+L + +++ E + +K++ KD W+ EKEM + L + G E E++++ A
Sbjct: 874 LEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAA 933
Query: 362 LQEKS 376
+ K+
Sbjct: 934 NETKA 938
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.1 bits (72), Expect = 0.22
Identities = 30/139 (21%), Positives = 66/139 (47%)
Frame = +2
Query: 200 KEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSE 379
K++ + E++ KD + ++ T E +S +++E E + ++A +EKSE
Sbjct: 257 KQLEEAQSSIENLKKDAENERNLKTALESDESS--AISEITKQMEAAKKELEASEKEKSE 314
Query: 380 LGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKF 559
L EQ+ R+Q++ + I L+ A + + +AR+ L+G++ +
Sbjct: 315 LREQM-DRLQKV---HNAGQEDIQKLQKTWELEMAKIAKSTEDEKLAREQLAGEL--ENA 368
Query: 560 LEDFEPIRKQMHIRKYKAE 616
ED + + ++ H +A+
Sbjct: 369 KEDLKVVEEEKHTGIQRAQ 387
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +2
Query: 197 LKEML-NDDAKFESV-LKDVKQVKD---WDTEKEMFIASNRSLAEFNLGKEPELERMKAE 361
L+E+L + +++ E + +K++ KD W+ EKEM + L + G E E++++ A
Sbjct: 874 LEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAA 933
Query: 362 LQEKS 376
+ K+
Sbjct: 934 NETKA 938
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 31.1 bits (67), Expect = 0.90
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Frame = +2
Query: 161 VMGLLAHLN--SNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKE 334
V L H+N +NE K+ LN + ++ Q+ +W +KE A+ ++ + +L +
Sbjct: 3235 VQRLWTHVNEVANERKQALNGARQVHRFDQEADQILNWLQDKE---ATGVAMEQEDLSR- 3290
Query: 335 PELERMKAELQEKSELGEQLCT---RIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQ 505
+L +KA+LQ E + ++ EL + + + PDT H L+ + EEQ
Sbjct: 3291 ADLASVKAQLQRHDEFMHGMKAVEKQVAELCHEAE-RLWNSFPDTRHH-LEVRRLDMEEQ 3348
Query: 506 SDNI---ARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMS 625
+I A+ L + F+ R+ M K M+
Sbjct: 3349 LKDILEAAKKHLEKLRHMQSLQSYFQEYREMMQWMKNMQSTMT 3391
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 203 EMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELER---MKAELQEK 373
E LN K L DVK+V+ W + + S+++ + N G LE+ KAE+ +
Sbjct: 2510 EKLNRSFKLYKYLDDVKKVEQWANQVRNKMTSHQTPKDSN-GARKILEQHHERKAEIDGR 2568
Query: 374 SE 379
SE
Sbjct: 2569 SE 2570
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 31.1 bits (67), Expect = 0.90
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Frame = +2
Query: 161 VMGLLAHLN--SNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKE 334
V L H+N +NE K+ LN + ++ Q+ +W +KE A+ ++ + +L +
Sbjct: 3235 VQRLWTHVNEVANERKQALNGARQVHRFDQEADQILNWLQDKE---ATGVAMEQEDLSR- 3290
Query: 335 PELERMKAELQEKSELGEQLCT---RIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQ 505
+L +KA+LQ E + ++ EL + + + PDT H L+ + EEQ
Sbjct: 3291 ADLASVKAQLQRHDEFMHGMKAVEKQVAELCHEAE-RLWNSFPDTRHH-LEVRRLDMEEQ 3348
Query: 506 SDNI---ARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMS 625
+I A+ L + F+ R+ M K M+
Sbjct: 3349 LKDILEAAKKHLEKLRHMQSLQSYFQEYREMMQWMKNMQSTMT 3391
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 203 EMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELER---MKAELQEK 373
E LN K L DVK+V+ W + + S+++ + N G LE+ KAE+ +
Sbjct: 2510 EKLNRSFKLYKYLDDVKKVEQWANQVRNKMTSHQTPKDSN-GARKILEQHHERKAEIDGR 2568
Query: 374 SE 379
SE
Sbjct: 2569 SE 2570
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 31.1 bits (67), Expect = 0.90
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Frame = +2
Query: 161 VMGLLAHLN--SNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKE 334
V L H+N +NE K+ LN + ++ Q+ +W +KE A+ ++ + +L +
Sbjct: 3235 VQRLWTHVNEVANERKQALNGARQVHRFDQEADQILNWLQDKE---ATGVAMEQEDLSR- 3290
Query: 335 PELERMKAELQEKSELGEQLCT---RIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQ 505
+L +KA+LQ E + ++ EL + + + PDT H L+ + EEQ
Sbjct: 3291 ADLASVKAQLQRHDEFMHGMKAVEKQVAELCHEAE-RLWNSFPDTRHH-LEVRRLDMEEQ 3348
Query: 506 SDNI---ARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMS 625
+I A+ L + F+ R+ M K M+
Sbjct: 3349 LKDILEAAKKHLEKLRHMQSLQSYFQEYREMMQWMKNMQSTMT 3391
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 203 EMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELER---MKAELQEK 373
E LN K L DVK+V+ W + + S+++ + N G LE+ KAE+ +
Sbjct: 2510 EKLNRSFKLYKYLDDVKKVEQWANQVRNKMTSHQTPKDSN-GARKILEQHHERKAEIDGR 2568
Query: 374 SE 379
SE
Sbjct: 2569 SE 2570
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 30.7 bits (66), Expect = 1.2
Identities = 29/140 (20%), Positives = 62/140 (44%)
Frame = +2
Query: 200 KEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSE 379
KEM D + D+K++ + + +++ + N+ + K+ E E+ K E +E+ +
Sbjct: 214 KEMKEIDVRRREA--DIKEMAETERKEKEKVEKNKMEMTEKIKKKDEDEKAKKE-KERID 270
Query: 380 LGEQLCTRIQELLDDYKTKSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKF 559
E++ ++E K + + + + + E S N +D + K +DK
Sbjct: 271 KEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSI-NPEMSRNDKKDVVEEKSCLDKG 329
Query: 560 LEDFEPIRKQMHIRKYKAEK 619
+D + +KQ + K EK
Sbjct: 330 AKDAQKKKKQQDVVDKKKEK 349
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/96 (22%), Positives = 48/96 (50%)
Frame = +2
Query: 131 KKMIQSDYPSVMGLLAHLNSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSL 310
+K +Q+D+ + + L + + + +D + + + K++K+ D + FI + R
Sbjct: 133 QKALQNDHENSIQLQLLKDGGQKERQEIEDRRIKEKNEHEKRIKEQDNQ---FIENQRQH 189
Query: 311 AEFNLGKEPELERMKAELQEKSELGEQLCTRIQELL 418
++ E ER +AE +EK + + ++QELL
Sbjct: 190 EIEENERKMEFERKQAEHEEKLQQIREKERKLQELL 225
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 29.9 bits (64), Expect = 2.1
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +2
Query: 173 LAHLNSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERM 352
LA L EL++ L++ + + L D++ D E E+F + +LAE E
Sbjct: 206 LAQLKK-ELRQALSERDEKDKHLSDLR---DKVKEIEIFNETQNTLAEGQKMMRKEQIEK 261
Query: 353 KAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHAL-----LQTAAAESEEQSDNI 517
+A +EK L ++ R+ +L+ + T T+ L ++ E Q+D I
Sbjct: 262 EALEKEKKLLEKKHAVRVNQLIQETMTAREEAVKLTSRVANLEEQLNPPKSDCETQTDEI 321
Query: 518 ARDF 529
RDF
Sbjct: 322 ERDF 325
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 29.9 bits (64), Expect = 2.1
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +2
Query: 173 LAHLNSNELKEMLNDDAKFESVLKDVKQVKDWDTEKEMFIASNRSLAEFNLGKEPELERM 352
LA L EL++ L++ + + L D++ D E E+F + +LAE E
Sbjct: 206 LAQLKK-ELRQALSERDEKDKHLSDLR---DKVKEIEIFNETQNTLAEGQKMMRKEQIEK 261
Query: 353 KAELQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTHAL-----LQTAAAESEEQSDNI 517
+A +EK L ++ R+ +L+ + T T+ L ++ E Q+D I
Sbjct: 262 EALEKEKKLLEKKHAVRVNQLIQETMTAREEAVKLTSRVANLEEQLNPPKSDCETQTDEI 321
Query: 518 ARDF 529
RDF
Sbjct: 322 ERDF 325
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 659 HMHSDCCFSTILTFS-RLCTSLYAFVYGWVQNLLEIYQHP 543
++H CCFST+L+ + LCT + W Q L +I +HP
Sbjct: 283 NLHVKCCFSTLLSQAVPLCTYPKKCL-SWNQVLADIDRHP 321
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 659 HMHSDCCFSTILTFS-RLCTSLYAFVYGWVQNLLEIYQHP 543
++H CCFST+L+ + LCT + W Q L +I +HP
Sbjct: 283 NLHVKCCFSTLLSQAVPLCTYPKKCL-SWNQVLADIDRHP 321
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 509 DNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELLRNSNQNAY 658
D + + + + ++ + + + +Q I KY+ +K E LRNS + AY
Sbjct: 289 DRVEKKYNNSVADMNSLPDKSQQLNEQYEIAKYRVDKHYEELRNSIEEAY 338
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 29.5 bits (63), Expect = 2.7
Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Frame = +2
Query: 188 SNELKEMLND-DAKFESVLKDVKQVKDW-DTEKEMFIASNRSLAEFNLGKEPELERMKAE 361
S ELK + + +A+ + ++ K++ + + EKE I+ + +L +E ++AE
Sbjct: 292 STELKTIRKEHEAQLQKKQEEWKKLHEQLEQEKEKLISEKEHAKQTHLKLAAAVENVEAE 351
Query: 362 LQEKSELGEQLCTRIQELLDDYKTKSAGISPDTTH---ALLQTAAAESEEQSDNIAR-DF 529
L+++ + QL T Q L A +S Q E + +N R +
Sbjct: 352 LEKQGKEWIQLSTHNQTLKQHNLELEAALSVAKARDQDGEAQKWTMEKAQMIENYTRLEA 411
Query: 530 LSGKMGVDKFLEDFEPIRKQMHI 598
L G++ D + +F +KQ +
Sbjct: 412 LIGELNRD--ISEFHEYKKQQEV 432
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 29.5 bits (63), Expect = 2.7
Identities = 31/135 (22%), Positives = 58/135 (42%)
Frame = +2
Query: 254 QVKDWDTEKEMFIASNRSLAEFNLGKEPELERMKAELQEKSELGEQLCTRIQELLDDYKT 433
++K T++ F A+ + E E+ER+K ELQ ++ R+Q L+
Sbjct: 3 RIKQAPTKRHSFKRMESREADESFLDEEEIERIKEELQRVQNEKKKHIQRMQARLE---- 58
Query: 434 KSAGISPDTTHALLQTAAAESEEQSDNIARDFLSGKMGVDKFLEDFEPIRKQMHIRKYKA 613
+S ++ DT AA S E + N+ F K +++ + E I ++ R+
Sbjct: 59 QSEALTSDTES---NEAARRSREPARNLVEGFQKVK---ERYRFNIEHIEEKYKAREESG 112
Query: 614 EKMSELLRNSNQNAY 658
S + + + N Y
Sbjct: 113 CPESRVEMDIHGNVY 127
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 155 PSVMGLLAHLNSNELKEMLNDDAKFESV---LKDVKQVKDWDTEKEMFIASNRSLAEFN 322
P++ H+ N L+E L++ K E+ +KD + + T+ E F + NR++ F+
Sbjct: 478 PTIDISTGHVVLNFLQEYLSEPTKIEAQWNGIKDYRNEERTKTKAEKFASQNRTILPFD 536
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 155 PSVMGLLAHLNSNELKEMLNDDAKFESV---LKDVKQVKDWDTEKEMFIASNRSLAEFN 322
P++ H+ N L+E L++ K E+ +KD + + T+ E F + NR++ F+
Sbjct: 478 PTIDISTGHVVLNFLQEYLSEPTKIEAQWNGIKDYRNEERTKTKAEKFASQNRTILPFD 536
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 155 PSVMGLLAHLNSNELKEMLNDDAKFESV---LKDVKQVKDWDTEKEMFIASNRSLAEFN 322
P++ H+ N L+E L++ K E+ +KD + + T+ E F + NR++ F+
Sbjct: 478 PTIDISTGHVVLNFLQEYLSEPTKIEAQWNGIKDYRNEERTKTKAEKFASQNRTILPFD 536
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 524 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELL 634
DF K+ ++K E+ EP ++IRK++AE+ +L+
Sbjct: 238 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLV 273
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 524 DFLSGKMGVDKFLEDFEPIRKQMHIRKYKAEKMSELL 634
DF K+ ++K E+ EP ++IRK++AE+ +L+
Sbjct: 235 DFTDEKV-INKLEEELEPKMSTLNIRKHQAEREEKLV 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,081,435
Number of Sequences: 27780
Number of extensions: 250092
Number of successful extensions: 816
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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