Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte29c06
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    34   0.001
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       30   0.015
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.24 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   1.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   1.7  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   2.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   2.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   2.2  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   3.0  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   3.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
 Frame = +3

Query: 177 STARCPTDLVLRSRQTCRVGDADVQCVRLHCCDTHQHVAGRCIPKSMEPCSLNLCEQA-- 350
           S + C T++       C+ G   +  +  + C   +   G+    +++ C  N C+    
Sbjct: 177 SGSYCQTEINECDSAPCQNGGTCLDLIGSYSCKCPKGFQGQNCELNVDDCKPNPCQNGGT 236

Query: 351 CEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQR--CVNDPGSFHCE 524
           C     S  CSC  G       Y  +     ++VD+C    G C     C++  G F C+
Sbjct: 237 CHDLVNSFSCSCPSG----TLGYICE-----INVDDCRP--GACHNNGTCLDKVGGFECK 285

Query: 525 CSP 533
           C P
Sbjct: 286 CPP 288



 Score = 26.6 bits (56), Expect = 0.18
 Identities = 20/117 (17%), Positives = 39/117 (33%)
 Frame = +3

Query: 177 STARCPTDLVLRSRQTCRVGDADVQCVRLHCCDTHQHVAGRCIPKSMEPCSLNLCEQACE 356
           S   C T+    +  +C  G   +  +  + C       G      +  C  + C     
Sbjct: 16  SGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNGAT 75

Query: 357 VQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQRCVNDPGSFHCEC 527
            Q  +   +C+  + +  +   +        VD C+TN    +  CV +   + C C
Sbjct: 76  CQDHTTHYTCHCPYGYTGKDCGEY-------VDWCSTNPCENQATCVQNKNQYQCLC 125


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 30.3 bits (65), Expect = 0.015
 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
 Frame = +3

Query: 264 HCCDTHQHVAGRCIPKSMEPCSLNLCEQA--CEVQGESMWCSCYPGFQFNAESYSKQEQP 437
           H C       G+   +++  C +N CE    C  +  +  C C  G+          E  
Sbjct: 52  HRCQCQPGFTGKYCHENINDCKVNPCENGGTCVDKINAFQCICKEGW----------EGA 101

Query: 438 YC-VDVDECATNNGGCEQRCVNDPGSFHCEC 527
            C ++ D+C+ N       CV+    F C C
Sbjct: 102 LCNINTDDCSPNPCRNNGSCVDRIADFECNC 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 52   WAPWPLCYFSSILL-PWYSATTTTADTERRNRTSLT 156
            W   P  ++SS    PW++ TTT   T  R  T+ T
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTST 1070


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -2

Query: 301 HRPATCW-CVSQQCSLTHCTSASP 233
           H P   W C++Q+C   H   A P
Sbjct: 52  HPPQWTWQCINQRCERRHIKGAIP 75


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 RWLLQNLFHLCAPPLDAT 633
           +W+ +N+ H C  P + T
Sbjct: 170 KWVQENIIHFCGDPNNVT 187


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 RWLLQNLFHLCAPPLDAT 633
           +W+ +N+ H C  P + T
Sbjct: 170 KWVQENIIHFCGDPNNVT 187


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 RWLLQNLFHLCAPPLDAT 633
           +W+ +N+ H C  P + T
Sbjct: 170 KWVQENVIHFCGDPNNVT 187


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 RWLLQNLFHLCAPPLDAT 633
           +W+ +N+ H C  P + T
Sbjct: 170 KWVQENVIHFCGDPNNVT 187


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 580 RWLLQNLFHLCAPPLDAT 633
           +W+ +N+ H C  P + T
Sbjct: 169 KWVQENVIHFCGDPNNVT 186


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 257 EAALLRYTPTRRW 295
           +AA +RY PT RW
Sbjct: 9   DAAPVRYGPTERW 21


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 257 EAALLRYTPTRRW 295
           +AA +RY PT RW
Sbjct: 9   DAAPVRYGPTERW 21


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 141 VPPLCIRCRRGSRVPGQQDRGEVTQ 67
           V P C     G+R+PGQ +   V Q
Sbjct: 161 VLPDCFCSADGTRIPGQLEPANVPQ 185



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 554 WQEMCPTDTAGYCRTSSTCA 613
           W+E C      YC   ++CA
Sbjct: 471 WKEKCDIKGQPYCSLPNSCA 490


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 141 VPPLCIRCRRGSRVPGQQDRGEVTQ 67
           V P C     G+R+PGQ +   V Q
Sbjct: 168 VLPDCFCSADGTRIPGQLEPANVPQ 192



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 554 WQEMCPTDTAGYCRTSSTCA 613
           W+E C      YC   ++CA
Sbjct: 478 WKEKCDIKGQPYCSLPNSCA 497


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 278 TPTRRWTVYSEINGAVQSEPV*ASMR 355
           TPT     +SE  G V SE V +S++
Sbjct: 9   TPTSSAPAFSEQRGGVISEGVASSLQ 34


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 463 RRTMVGVSNAASMIL 507
           RRT++GVSNA    L
Sbjct: 316 RRTILGVSNAVITFL 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,189
Number of Sequences: 336
Number of extensions: 4047
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)